ICS Publications - CBML

Periodicals (274)

    Journal Articles

  1. Papadakis Z., G., Millo, C., Jassel, IS., Bagci, U., Sadowski, SM., Karantanas, A., & Patronas, NJ. (2017). 18F-FDG and 68Ga-DOTATATE PET/CT in von Hippel-Lindau Disease-Associated Retinal Hemangioblastoma. Clin Nucl Med42(3), 189-190, doi: 10.1097/RLU.0000000000001511 PMID:28033220 .
  2. Papadakis Z., G., Jha, S., Bhattacharyya, T., Millo, C., Tu, TW., Bagci, U., Marias, K., Karantanas, A., & Patronas, NJ. (2017). 18F-NaF PET/CT in Extensive Melorheostosis of the Axial and Appendicular Skeleton With Soft-Tissue Involvement. Clin Nucl Med42(7), 537-539, doi: 10.1097/RLU.0000000000001647 PMID:28319505 .
  3. Pampouchidou, A., Simos, P.G., Marias, K., Meriaudeau, F., Yang, F., Pediaditis, M., & Tsiknakis, M.N. (2017). Automatic Assessment of Depression Based on Visual Cues: A Systematic Review . IEEE Transactions on Affective Computing, IEEE (http://ieeexplore.ieee.org/document/8052569/), doi: 10.1109/TAFFC.2017.2724035.
  4. Papadakis Z., G., Millo, C., Karantanas, A., Bagci, U., & Patronas, NJ. (2017). Avascular Necrosis of the Hips With Increased Activity on 68Ga-DOTATATE PET/CT. Clin Nucl Med42(3), 214-215, doi: 10.1097/RLU.0000000000001513 PMID:28033218 .
  5. Papadakis Z., G., Millo, C., Sadowski, SM., Karantanas, A., Bagci, U., & Patronas, NJ. (2017). Breast Fibroadenoma With Increased Activity on 68Ga DOTATATE PET/CT. Clin Nucl Med42(2), 145-146, doi: 10.1097/RLU.0000000000001463 PMID:27879489 .
  6. Manikis, G., Marias, K., Lambregts, D. M., Nikiforaki, K., Heeswijk, M.V., Bakers, F. CH, Beets-Tan, R. G., & Papanikolaou, N. (2017). Diffusion weighted imaging in patients with rectal cancer: Comparison between Gaussian and non-Gaussian models. PLoS One12(9), e0184197, Public Library of Science https://doi.org/10.1371/journal.pone.0184197.
  7. Kondylakis, H., Koumakis, L., Hanold, S., Nwankwo, I., Forgó, N., Marias, K., Tsiknakis, M.N., & Graf, N. (2017). Donor’s Support Tool: Enabling Informed Secondary Use of Patient’s Biomaterial and Personal Data. International Journal of Medical Informatics, 282-292, Elsevier doi: 10.1016/j.ijmedinf.2016.10.019 .
  8. Lakiotaki, K., Kanterakis, A., Kartsaki, E., Katsila, T., Patrinos, GP., & Potamias, G.A. (2017). Exploring public genomics data for population pharmacogenomics. PLoS One12(8), e0182138, Public Library of Science (http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0182138), doi: https://doi.org/10.1371/journal.pone.0182138.
  9. Papadakis Z., G., Millo, C., Sadowski, SM., Karantanas, A., Bagci, U., & Patronas, NJ. (2017). Fibrous Dysplasia Mimicking Malignancy on 68Ga-DOTATATE PET/CT. Clin Nucl Med42(3), 209-210, doi: 10.1097/RLU.0000000000001527 PMID:28072620.
  10. Oraiopoulou, M.E., Tzamali, E., Tzedakis, G., Vakis, A., Papamatheakis, J., & Sakkalis, V. (2017). In vitro/ in silico study on the role of doubling time heterogeneity among primary Glioblastoma cell lines. BioMed Research International, Special Issue: Basic and Translational Advances in Glioblastoma (BTAG), Hindawi (https://www.hindawi.com/journals/bmri/2017/8569328/), doi: 10.1155/2017/8569328.
  11. Katehakis, D.G., Kondylakis, H., Koumakis, L., Kouroubali, A., & Marias, K. (2017). Integrated Care Solutions for the Citizen: Personal Health Record Functional Models to support Interoperability. European Journal for Biomedical Informatics (EJBHI)13(1), 41-56.
  12. Koumakis, L., & Roussos, P, Potamias, G.A. (2017). minepath.org: a free interactive pathway analysis web server. Nucleic Acids Research, W116-W121, Oxford Academic doi: https://doi.org/10.1093/nar/gkx278 Web server Issue (Annual).
  13. Henriquez, P., Matuszewski, B., Andreu, Y., Bastiani, L., Colantonio, S., Coppini, G., Acunto, M., Favilla, R., Germanese, D., Giorgi, D., Marraccini, P., Martinelli, M., Morales, M.A., Pascali, M.A., Righi, M., Salvetti, O., Larsson, M., Stromberg, T., Randeberg, L., Bjorgan, A., Giannakakis, G., Pediaditis, M., Chiarugi, F., Christinaki, E., Marias, K., & Tsiknakis, M.N. (2017). Mirror mirror on the wall... an unobtrusive intelligent multisensory mirror for well-being status self-assessment and visualization. IEEE Transaction on Multimedia19(7), 1467-1481, doi: https://doi.org/10.1109/tmm.2017.2666545.
  14. Troullinou, G., Kondylakis, H., Daskalaki, E., & Plexousakis, D. (2017). Ontology Understanding without Tears: The summarization approachThe Semantic Web journal.
  15. Papadakis Z., G., Karantanas, A., & Perisinakis, K. (2017). Pulmonary embolism diagnostics of pregnant patients: What is the recommended clinical pathway considering the clinical value and associated radiation risks of available imaging tests?. Phys Med,  pii: S1120-1797(17)30237-5 doi:10.1016/j.ejmp.2017.07.017 PMID:28760505.
  16. Pampouchidou, A., Pediaditis, M., Maridaki, A., Awais, M., Vazakopoulou, C.-M., Sfakianakis, S.G., Tsiknakis, M.N., Simos, P.G., Marias, K., Yang, F., & Meriaudeau, F. (2017). Quantitative comparison of motion history image variants for video-based depression assessment. EURASIP Journal on Image and Video Processing, 64, Springer Open (https://jivp-eurasipjournals.springeropen.com/articles/10.1186/s13640-017-0212-3), Special Issue on “Applications of Visual Analysis of Human Behaviour” doi: https://doi.org/10.1186/s13640-017-0212-3.
  17. Katehakis, D.G., Pangalos, G., & Prentza, A. (2017). Security Improvements for Better and Safer Cross-Border ePrescription and Patient Summary Services. International Journal of Reliable and Quality E-Healthcare (IJRQEH)6(1), 18-28, doi:10.4018/IJRQEH.2017010102.
  18. Troullinou, G., Kondylakis, H., & Plexousakis, D. (2017). Semantic Partitioning for RDF Datasets. Communications in Computer and Information Science, Springer.
  19. Nikiforaki, K., Manikis, G., Boursianis, T., Marias, K., Karantanas, A., & Maris, T (2017). The Impact of Spin Coupling Signal Loss on Fat Content Characterization in Multi-Echo multi echo acquisitions with different echo spacing. Magnetic Resonance Imaging, 6-12, Elsevier doi: http://doi.org/10.1016/j.mri.2016.12.011 .
  20. Katsaros, V. K., Nikiforaki, K., Manikis, G., Marias, K., Liouta, E., Boskos, C., Kyriakopoulos, G., Stranjalis, G., & Papanikolaou, N. (2017). Whole tumor MR Perfusion histogram analysis in the preoperative assessment of patients with gliomas: Differentiation between high- and low-grade tumors. Hellenic Journal of Radiology (HJR)2(1).
  21. Spanakis, C., Mathioudakis, E., Kampanis, N.A., Tsiknakis, M.N., & Marias, K. (2016). A Proposed Method for Improving Rigid Registration Robustness. International Journal of Computer Science and Information Security14, 1-11, (19475500).
  22. Gorini, A., Mazzocco, K., Kondylakis, H., & McVie, G, Pravettoni, G (2016). A web-based interactive tool to improve breast cancer patient centredness. Ecancermedicalscience.10(659), Ecancermedicalscience.
  23. Spanakis, M., Kontopodis, E., Van Cauter, S., & Marias, K. (2016). Assessment of DCE-MRI parameters for brain tumors through implementation of physiologically-based pharmacokinetic model approaches for Gd-DOTA. J Pharmacokinet Pharmacodyn43(5), 529-547, doi: 10.1007/s10928-016-9493-x. Epub 2016 Sep 19. PubMed PMID: 27647272. http://link.springer.com/article/10.1007/s10928-016-9493-x .
  24. Kondylakis, H., Koumakis, L., Tsiknakis, M.N., Marias, K., & Kiefer, S. (2016). Big Data in Support of the Digital Cancer Patient. ERCIM News, 27-28.
  25. Kartalis, N., Manikis, G., Loizou, L., Albiin, N., Zollner, F.G., Del Chiaro, M., Marias, K., & Papanikolaou, N. (2016). Diffusion-weighted MR imaging of pancreatic cancer: A comparison of mono-exponential, bi-exponential and non-Gaussian kurtosis models. European Journal of Radiology Open3, 79-85, (2352-0477).
  26. Kartalis, N., Manikis, G., Loizou, L., Albiin, N., Zollner, F.G., Del Chiaro, M., Marias, K., & Papanikolaou, N. (2016). Diffusion-weighted MR imaging of pancreatic cancer: A comparison of mono-exponential, bi-exponential and non-Gaussian kurtosis models. European Journal of Radiology, 79-85, Elsevier (2352-0477), doi: http://dx.doi.org/10.1016/j.ejro.2016.04.002.
  27. Vizirianakis, I. S., Mystridis, G. A., Avgoustakis, K, Fatouros, D. G., & Spanakis, M. (2016). Enabling personalized cancer medicine decisions: The challenging pharmacological approach of PBPK models for nanomedicine and pharmacogenomics. Oncol Rep. 2016 .
  28. Lakiotaki, K., Kartsaki, E., Kanterakis, A., Katsila, T., Patrinos, GP., & Potamias, G.A. (2016). ePGA: A Web-Based Information System for Translational Pharmacogenomics. PLoS One11(9), e0162801, Public Library of Science (http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0162801), doi: https://doi.org/10.1371/journal.pone.016280.
  29. Takis G., P., Oraiopoulou, M.E., Konidaris, C., Troganis N., & A. (2016). H-NMR based metabolomics study for the detection of the human urine metabolic profile effects of Origanum dictamnus tea ingestion. Food and Function, The Royal Society of Chemistry doi: 10.1039/c6fo00560h.
  30. Koumakis, L., Kanterakis, A., Kartsaki, E., Chatzimina, M., Zervakis, M.E., Tsiknakis, M.N., Vassou, D., Kafetzopoulos, D., Marias, K., Moustakis, V.A., & Potamias, G.A. (2016). MinePath: mining for phenotype differential sub-paths in molecular pathways. PLoS computational biologye1005187, Public Library of Science doi: https://doi.org/10.1371/journal.pcbi.1005187 .
  31. Marakakis, M., & Kondylakis, H. (2016). Mode Analysis During Program Development. International Journal on Artificial Intelligence Tools (IJAIT)25(2).
  32. Mehta, S., Hughes, N. P., Li , S., Jubb, A., Adams, R., Lord, S., Koumakis, L., van Stiphout, R., Padhani, A., Makris, A., Buffa, F., & Harris, A. L. (2016). Radiogenomics monitoring in breast cancer identifies metabolism and immune checkpoints as early actionable mechanisms of resistance to anti-angiogenic treatment. EBioMedicine, 109-116, Elsevier doi: https://doi.org/10.1016/j.ebiom.2016.07.017.
  33. Katehakis, D.G., Pangalos, G., & Prentza, A. (2016). Research Note: A European eHealth Space for Moving Cross-border ePrescription and Patient Summary Services Forward. Transforming Government: People, Process and Policy10(3), 478-504, (ISSN: 1750-6166).
  34. Giannakakis, G., Pediaditis, M., Manousos, D., Kazantzaki, E., Chiarugi, F., Simos, P.G., Marias, K., & Tsiknakis, M.N. (2016). Stress and anxiety detection using facial cues from videos. Biomedical Signal Processing and Control31, 89-101, ELSEVIER doi: http://dx.doi.org/10.1016/j.bspc.2016.06.020.
  35. Stavrinidis, G., Michelakis, K., Kontomitrou, V., Giannakakis, G., Sevrisarianos, M., Sevrisarianos, G., Chaniotakis, N., Alifragis, Y., & Konstantinidis, G. (2016). Su-8 microneedles based dry electrodes for electroencephalogram. Microelectronic Engineering159, 114-120.
  36. Spanakis, E.G., Santana, S., Tsiknakis, M.N., Marias, K., Sakkalis, V., Teixeira, A., Janssen, J.H., de Jong, H., & Tziraki, C. (2016). Technology-Based Innovations to Foster Personalized Healthy Lifestyles and Well-Being: A Targeted Review. J Med Internet Res 18(6),  e128, DOI: 10.2196/jmir.4863, PMID: 27342137, http://www.jmir.org/2016/6/e128/.
  37. Renzi, C., Fioretti, C., Mazzocco, K., Manfrinati, A., Kondylakis, H., Kazantzaki, E., Koumakis, L., Marias, K., Tsiknakis, M.N., & Pravettoni, G (2016). The development of a psycho‐emotional and family resilience assessment within an eHealth platform. Psycho-Oncology 25(3), 195.
  38. Kondylakis, H., Claerhout, B., Keyur, M., Koumakis, L., Marias, K., Perez-Rey, D., Schepper, K. de, Tsiknakis, M.N., & Bucur, A. (2016). The INTEGRATE Project: Delivering solutions for efficient multi-centric clinical research and trials. Journal of Biomedical Informatics.
  39. Schaller, S., Marinova-Schmidt, V., Setzer, M., Kondylakis, H., Griebel, L., Sedlmayr, M., Graessel, E., Maler, J.M., Kirn, S., & Kolominsky-Rabas, P. (2016). Usefulness of a tailored eHealth service for informal caregivers and professionals in the dementia treatment and care setting: the eHealthMonitor Dementia Portal. JMIR Research Protocols.
  40. Andreu, Y., Chiarugi, F., Colantonio, S., Giannakakis, G., Giorgi, D., Henriquez, P., Kazantzaki, E., Manousos, D., Marias, K., Matuszewski, B., Pascali, M.A., Pediaditis, M., Raccichini, G., & Tsiknakis, M.N. (2016). Wize mirror - a smart, multisensory cardio-metabolic risk monitoring system. Computer Vision and Image Understanding148, 3-22.
  41. Bucur, A., van Leeuwen, J, Christodoulou, N., Sigdel, K., Argyri, K., Koumakis, L., Graf, N., & Stamatakos, G.S. (2016). Workflow-driven clinical decision support for personalized oncology. BMC medical informatics and decision making16(2), 87, BioMed Central doi: 10.1186/s12911-016-0314-3.
  42. Marketakis, Y., Minadakis, N., Kondylakis, H., Konsolaki, K., Samaritakis, G., Theodoridou, M., Flouris, G., & Doerr, M. (2016). X3ML mapping framework for information integration in cultural heritage and beyond. International Journal on Digital Libraries, 1-19.
  43. Roniotis, A., Oraiopoulou, M.E., Tzamali, E., Kontopodis, E., Van Cauter, S., Sakkalis, V., & Marias, K. (2015). A proposed paradigm shift in initializing cancer predictive models with DCE-MRI based PK parameters: A feasibility study. Cancer Informatics 14(S4), 7-18.
  44. Kontopodis, E., Kanli, G., Manikis, G., Van Cauter, S., & Marias, K. (2015). Assessing Treatment Response Through Generalized Pharmacokinetic Modeling of DCE-MRI Data. , 14(4), 41-51.
  45. Karavasili, C., Spanakis, M., Papagiannopoulou, D., Vizirianakis, I. S., Fatouros, D. G., & Koutsopoulos, S. (2015). Bioactive self-assembling lipid-like peptides as permeation enhancers for oral drug delivery. J Pharm Sci. 2015104(7).
  46. Koumakis, L., Kamana, S, Potamias, G.A., Sfakianakis, S.G., van Leeuwen, J, Zacharioudakis, G., Moustakis, V.A., Zervakis, M.E., Bucur, A., Marias, K., Graf, N., & Tsiknakis, M.N. (2015). Bridging miRNAs and pathway analysis in clinical decision support; a case study in nephroblastoma. Network Modeling Analysis in Health Informatics and Bioinformatics4(1).
  47. Koumakis, L., Sigdel, K., Potamias, G.A., Sfakianakis, S.G., van Leeuwen, J, Zacharioudakis, G., Moustakis, V.A., Zervakis, M.E., Bucur, A., Marias, K., Graf, N., & Tsiknakis, M.N. (2015). Bridging miRNAs and pathway analysis in clinical decision support: a case study in nephroblastoma. Network modeling analysis in health informatics and bioinformatics, 1-12, Springer doi: 10.1007/s13721-015-0102-5.
  48. Lagani, V., Chiarugi, F., Thomson, S., Fursse, J., Lakasing, E., Jones, R.W., & Tsamardinos, I. (2015). Development and validation of risk assessment models for diabetes-related complications based on the DCCT/EDIC data. Journal of Diabetes and its Complications29(4), 479-487.
  49. Genitsaridi , I., Kondylakis, H., Koumakis, L., Marias, K., & Tsiknakis, M.N. (2015). Evaluation of Personal Health Record Systems through the Lenses of EC Research Projects. Computers in Biology and Medicine Journal59, 175-185.
  50. Crespo-Garcia, S., Reichhart, N., Hernandez-Matas, , C, Zabulis, X., Kociok, N., Brockmann, C., Joussen, A.M., & Strauß, O. (2015). In Vivo Analysis of the Time and Spatial Activation Pattern of Microglia in the Retina Following Laser-Induced Choroidal Neovascularization. Experimental Eye Research139, 13-21, (ISSN 0014-4835).
  51. Martens, M. H., Lambregts, D. M., Papanikolaou, N., Alefantinou, S., Maas, M., Manikis, G., Marias, K., Riedl, R., & Beets, G. , Beets-Tan, R. G. (2015). Magnetization transfer imaging to assess tumour response after chemoradiotherapy in rectal cancer. .
  52. Zablith, F., Antoniou, G., d'Aquin, M., Flouris, G., Kondylakis, H., Motta, E., Plexousakis, D., & Sabou, M. (2015). Ontology Evolution: A Process Centric SurveyKnowledge Engineering Review (KER)30(1), 45-75, Cambridge Journals (pdf).
  53. Kanterakis, A., Kuiper, J., Potamias, G.A., & Swertz, M.A. (2015). PyPedia: using the wiki paradigm as crowd sourcing environment for bioinformatics protocols. Source Code for Biology and Medicine10(1), 1-14, Springer Nature (https://scfbm.biomedcentral.com/articles/10.1186/s13029-015-0042-6), doi: https://doi.org/10.1186/s13029-015-0042-6.
  54. Lagani, V., Chiarugi, F., Manousos, D., Verma, V., Fursse, J., Marias, K., & Tsamardinos, I. (2015). Realization of a service for the long-term risk assessment of diabetes-related complications. Journal of Diabetes and its Complications29(5), 691-698.
  55. Sfakianaki, P., Koumakis, L., Sfakianakis, S.G., Iatraki, G., Zacharioudakis, G., Graf, N., Marias, K., & Tsiknakis, M.N. (2015). Semantic biomedical resource discovery: a Natural Language Processing framework. BMC Medical Informatics and Decision Making 15(77).
  56. Hochedlinger, N, Nitzlnader, M, Falgenhauer, M, Welte, S, Hayn, D, Koumakis, L., Potamias, G.A., Tsiknakis, M.N., Saraceno, D., Rinaldi, E., Ladenstein, R., & Schreier, G. (2015). Standardized Data Sharing in a Paediatric Oncology Research Network-A Proof-of-Concept Study. Stud Health Technol Inform, 27-34, doi: 10.3233/978-1-61499-524-1-27.
  57. Notas, G. , Pelekanou, V., Kampa, M., Alexakis, K., Sfakianakis, S.G., Laliotis, A., Askoxilakis, J., Tsentelierou, E., Tzardi, M., Tsapis, A., & Castanas, E. (2015). Tamoxifen induces a pluripotency signature in breast cancer cells and human tumors. Molecular Oncology.
  58. Tzedakis, G., Tzamali, E., Marias, K., & Sakkalis, V. (2015). The Importance of Neighborhood Scheme Selection in Agent-based Tumor Growth Modeling. Cancer Informatics.
  59. Farmaki, C., Sakkalis, V., Gjini, K., Boutros, N. N., & Zouridakis, G. (2014). Assessment of Sensory Gating Deficit in Schizophrenia Using a Wavelet Transform Methodology on Auditory Paired-Click Evoked Potentials. Modern Electroencephalographic Assessment Techniques. Neuromethods91, 205-229, Humana Press doi: https://doi.org/10.1007/7657_2014_71.
  60. Potamias, G.A., Lakiotaki, K., Katsila, T., Lee, MT., Topouzis, S., Cooper, DN., & Patrinos, GP. (2014). Deciphering next-generation pharmacogenomics: an information technology perspective. Open Biology 4(7), 66-77, (http://rsob.royalsocietypublishing.org/content/4/7/140071.short ), doi: 10.1098/rsob.140071.
  61. Kondylakis, H., Kazantzaki, E., Koumakis, L., Genitsaridi , I., Marias, K., Gorini, A., Mazzocco, K., & Pravettoni, G, Burke, D, McVie, G, Tsiknakis, M.N. (2014). Development of Interactive Empowerment services in support of personalized medicine. eCancer Medical Science Journal.
  62. Spanakis, M., & Marias, K. (2014). In silico evaluation of gadofosveset pharmacokinetics in different population groups using the SimcypΒ® simulator platform. , 2(2), (doi:10.1186/s40203-014-0002-x).
  63. Kalaitzakis, G., Kavroulakis, L., Boursianis, T., Veneti, S., Kontopodis, E., Marias, K., Papadaki, E., Karantanas, A., & Maris, Th.G. (2014). Magnetic relaxation measurements on tissue mimicking phantoms: comparison between different fitting algorithms in MRI T2 calculations. Physica Medica 30(1), 118-119.
  64. Sfakianakis, S.G., Bei, E. S., Zervakis, M.E., Vassou, D., & Kafetzopoulos, D. (2014). On the Identification of Circulating Tumor Cells in Breast Cancer. Biomedical and Health Informatics, IEEE J Biomed Health Inform18(3), 773-782.
  65. Maris, Th.G., Boursianis, T., Kalaitzakis, G., Pappas, E., Manikis, G., Marias, K., & Karantanas, A. (2014). The development of an easily adopted head and abdomen DWI quality control phantom and test different regression algorithms for precise Apparent Diffusion Coefficient (ADC) measurements. Physica Medica.
  66. Stamatakos, G.S., Dionysiou, D.D., Lunzer, A., Belleman, R., Kolokotroni, E., Georgiadi, E., Erdt, M., Dong, F., Rueping, S., Giatili, S., d Onofrio, A., Sfakianakis, S.G., Marias, K., Desmedt, C., Tsiknakis, M.N., & Graf, N. (2014). The Technologically Integrated Oncosimulator: Combining Multiscale Cancer Modeling with Information Technology in the In Silico Oncology Context. . , 18(3), 840-854, doi: 10.1109/JBHI.2013.2284276.
  67. Spanakis, E.G., Sakkalis, V., Marias, K., & Traganitis, A.P. (2014). Cross Layer Interference Management in Wireless Biomedical NetworksEntropy16(4), 2085-2104, Multidisciplinary Digital Publishing Institute (MDPI).
  68. Hristoskova, A., Sakkalis, V., Zacharioudakis, G., Tsiknakis, M.N., & De Turck, F. (2014). Ontology-Driven Monitoring of Patient’s Vital Signs Enabling Personalized Medical Detection and AlertSensors 14(1), 1598-1628.
  69. Vavoulas, G., Pediaditis, P., Chatzaki, C, Spanakis, E.G., & Tsiknakis, M.N. (2014). The MobiFall Dataset: Fall Detection and Classification with a SmartphoneInternational Journal of Monitoring and Surveillance Technologies Research (IJMSTR)2(1), 44-56, IGI Global.
  70. Sakkalis, V., Sfakianakis, S.G., Tzamali, E., Marias, K., Stamatakos, G.S., Misichroni, F., Ouzounoglou, E., Kolokotroni, E., Dionysiou, D.D., Johnson, D., McKeever, S., & Graf, N. (2014). Web-Based Workflow Planning Platform Supporting the Design and Execution of Complex Multiscale Cancer ModelsIEEE Journal of Biomedical and Health Informatics.
  71. Lagani, V., Koumakis, L., Chiarugi, F., Lakasing, E., & Tsamardinos, I. (2013). A systematic review of predictive risk models for diabetes complications based on large scale clinical studies. Journal of Diabetes and Its Complications.
  72. Hunter, P., Chapman , T, Coveney, P.V., de Bono, B., Diaz, V., Fenner, J., Frangi, A.F., Harris, P., Hose, R., Kohl, P., Lawford, P., McCormack, K., Mendes, M., Omholt, S., Quarteroni, A., Shublaq, N, Skar, J., Stroetmann, K, Tegner, J., Thomas, S.R, Tollis, I.G., Tsamardinos, I., van Beek, J.H.G.M., & Viceconti, M. (2013). A vision and strategy for the VPH: 2012 updateInterface Focus.
  73. Lagani, V., & Kortas, G, Tsamardinos, I. (2013). Biomarker signature identification in “omics” data with multi-class outcomeComputational and Structural Biotechnology Journal6(7).
  74. Johnson, D., McKeever, S., Stamatakos, G.S., Dionysiou, D.D., Graf, N., Sakkalis, V., Marias, K., Wang, Z., & Deisboeck, T. (2013). Dealing with Diversity in Computational Cancer ModelingCancer Informatics12, 115-124.
  75. Karakasilioti, I, Kamileri, I, Chatzinikolaou, G, Kosteas, T, Vergadi, E, Robinson, AR, Tsamardinos, I., & Rozgaja, TA, Siakouli, S, Tsatsanis, C, Niedernhofer, L J, Garinis, G. (2013). DNA Damage Triggers a Chronic Autoinflammatory Response, Leading to Fat Depletion in NER ProgeriaCell Metabolism18(3), 403-415.
  76. Kouroubali, A., Katehakis, D.G., Berler, A., & Tsiknakis, M.N. (2013). Electronic Health Record: Luxury or Need? (in Greek). Health Review Scientific Magazine24(140), 5-9, Greece: Hellenic Health Services Management Association (HHSMA).
  77. Arcuri, F., Lucca, L. F., Lagani, V., Rosadini, V., Mercurio, G., & Mazzucchi, A. (2013). Evaluation of autonomies in the severely brain injured: the Progression of Autonomies Scale. Functional Neurology28(1), 29-38.
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  82. Tsamardinos, I., Borboudakis, G., Christodoulou, E., & Roe, O. D. (2012). Chemosensitivity Prediction of Tumours Based on Expression, miRNA, and Proteomics Data . International Journal of Systems Biology and Biomedical Technologies (IJSBBT)1(2), 1-19.
  83. Koumakis, L., Moustakis, V.A., Zervakis, M.E., Kafetzopoulos, D., & Potamias, G.A. (2012). Coupling Regulatory Networks and Microarays: Revealing Molecular Regulations of Breast Cancer Treatment Responses. Artificial Intelligence: Theories and Applications. Lecture Notes in Computer Science7297, 239-246.
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  85. Spanakis, E.G., Chiarugi, F., Kouroubali, A., Spat, S., Beck, B., Asanin, S., Rosengren, P., Gergely, G.T., & Thestrup, J. (2012). Diabetes Management Using Modern Information and Communication Technologies and New Care Modelsi-JMR nteractive Journal of Medical Research1(5).
  86. Kartakis, S., Sakkalis, V., Tourlakis, P., Zacharioudakis, G., & Stephanidis, C. (2012). Enhancing Health Care Delivery through Ambient Intelligence ApplicationsSensors12, 11435-11450.
  87. Dato, S., Montesanto, A., Lagani, V., Jeune, B., Christensen, K., & Passarino, G. (2012). Frailty phenotypes in the elderly based on cluster analysis: a longitudinal study of two Danish cohorts. Evidence for a genetic influence on frailty. AGE34(3), 571-582.
  88. Roniotis, A., Manikis, G., Sakkalis, V., Zervakis, M.E., Karatzanis, I., & Marias, K. (2012). High grade glioma diffusive modeling using statistical tissue information and diffusion tensors extracted from atlases. IEEE Transactions on Information Technology in Biomedicine.16(2), 255-263.
  89. Roniotis, A., Sakkalis, V., Karatzanis, I., Zervakis, M.E., & Marias, K. (2012). In-depth analysis and evaluation of diffusive glioma models. IEEE Transactions on Information Technology in Biomedicine 201216(3), 299-307.
  90. Maojo, V., Fritts, M., Martin-Sanchez, F., De La Iglesia, D., Cachau, R. E. , Garcia-Remesal, M., Crespo, J., Mitchell, J.A., Anguita, A., Baker, N., Barreiro, J. M., Benitez, S. E., De la Calle, G., Facelli, J. C., Ghazal, P., Gonzalez-Nilo, F., Graf, N., Grangeat, P., Hermosilla, I., Hussein, R., Kern, J., Koch, S., Legre, Y., Lopez-Alonso, V., Lopez-Campos, G., Milanesi, L., Moustakis, V.A., Munteanu, C., Otero, P., Pazos, A., Perez-Rey, D., Potamias, G.A., Sanz, F., & Kulikowski, C. (2012). Nanoinformatics: developing new computing applications for nanomedicine. Computing94(6), 521-539.
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  92. Roniotis, A., Marias, K., Sakkalis, V., Manikis, G., & Zervakis, M.E. (2012). Simulating radiotherapy effect in high grade glioma by using diffusive modeling and brain atlases. Journal of Biomedicine and Biotechnology 2012.
  93. Brown, L.E., Tsamardinos, I., & Hardin, D. (2012). To Feature Space and Back: Identifying Top-Weighted Features in Polynomial Support Vector Machines Models. Intelligent Data Analysis 16(4), 551-579.
  94. Tsamardinos, I., Triantafullou, S., & Lagani, V. (2012). Towards Integrative Causal Analysis of Heterogeneous Datasets and Studies. Journal of Machine Learning Research13, 1097-1157.
  95. Potamias, G.A., Kaforou, S., & Kafetzopoulos, D. (2012). Towards Optimal Microarray Universal Reference Sample Designs: An In-Silico Optimization Approach. International Journal of Systems Biology and Biomedical Technologies (IJSBBT)1(2), 66-77.
  96. Dato, S., Soerensen, M, Montesanto, A., Lagani, V., Passarino, G., Christensen, K., & Christiansen, L. (2012). UCP3 polymorphisms, hand grip performance and survival at old age: association analysis in two Danish middle aged and elderly cohorts. Mechanisms of Ageing and Development133(8), 530-537.
  97. Pediaditis, M., Tsiknakis, M.N., & Leitgeb, N. (2012). Vision-based human motion detection, analysis and recognition in epilepsy – a systematic review. Comput. Methods Programs Biomed.108(3), 1133-1148.
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  100. Tzamali, E., Poirazi, P., Tollis, I.G., & Reczko, M. (2011). A computational exploration of bacterial metabolic diversity identifying metabolic interactions and growth-efficient strain communities. BMC Systems Biology 20115(167).
  101. Sakkalis, V. (2011). Applied strategies towards EEG/MEG biomarker identification in clinical and cognitive research. Biomarkers in Medicine, future medicine5(1), 93-105.
  102. Christodoulou, E., Sakkalis, V., Tsiaras, V., & Tollis, I.G. (2011). BrainNetVis: An open-access tool to effectively quantify and visualize brain networks. Computational Intelligence & Neuroscience CIN.
  103. Arbelo, E., Trucco, E., Dogac, A., Luepkes, C., Chronaki, C., Hinterbuchner, L., Ploessnig, M., Yang, M., Guillén, A., & Brugada, J. (2011). Brugada iCARDEA: Personalized Remote Monitoring of Atrial Fibrillation in Patients with Electronic Implant Devices. PACE (ICPES2011, P193)34(11).
  104. Marias, K., Dionysiou, D.D., Sakkalis, V., Graf, N., Bohle, R., Coveney, P.V., Wan, S., Folarin, A., Büchler, P., Reyes, M., Clapworthy, G., Liu, E., Sabczynski, J., Bily, T., Roniotis, A., & Tsiknakis, M.N. (2011). Clinically-Driven Design of Multiscale Cancer Models: the Contra Cancrum Project Paradigm. J. R. Soc Interface Focus1, 450-461.
  105. Santana, S.M.V., Lausen, B., Bujnowska-Fedak, M., Chronaki, C., Prokosch, H.U., & Wynn, R. (2011). Informed citizen and empowered citizen in health: results from an European survey. BMC Family Practice 2011 (Impact Factor 1.47)12(20).
  106. Chronaki, C., Sfakianakis, S.G., Petrakis, Y., Yang, M., Radulescu, M., Eichelberg, M., Erturkmen, G.L., Hinterbuchner, L., Arbelo, E., & Dogac, A. (2011). Integrating Out-Patient and Remote Follow-up of Cardiovascular Implantable Electronic Device Patients. PACE (ICPES2011)34(11), 1357-8.
  107. Chronaki, C., Kontogiannis, V., Panagopoulos, D., Katehakis, D.G., Vourvahakis, D., & Koutentaki-Mountraki, K. (2011). Interoperability in Disaster Medicine and Emergency Management. J. Health Inform. 2011 3, 87-99.
  108. Zervakis, M.E., Michalopoulos, K., Iordanidou, V., & Sakkalis, V. (2011). Intertrial Coherence and Causal Interaction among Independent EEG Components. Journal of Neuroscience Methods197(2), 302-316.
  109. Katehakis, D.G., Halkiotis, S., & Kouroubali, A. (2011). Materialization of Regional Health Information Networks in Greece: Electronic Health Record Barriers & Enablers. Journal of Healthcare Engineering, Multi-Science Publishing2(3), 389-403.
  110. Tsiliki, G., Zervakis, M.E., Ioannou, M., Sanidas, E., Stathopoulos, E., Potamias, G.A., Tsiknakis, M.N., & Kafetzopoulos, D. (2011). Multi-platform Data Integration in Microarray Analysis. IEEE Transactions on Information Technology in Biomedicine15(6), 806-812, IEEE Engineering in Medicine and Biology Society, IEEE Computer Society [Technical Co-Sponsor] (1089-7771).
  111. Trucco, E., Arbelo, E., Erturkmen, G.L., Yang, M., Kabak, Y., Chronaki, C., Hinterbuchner, L., Guillén, A., Dogac, A., & Brugada, J. (2011). Personalized Remote Monitoring of Atrial Fibrillation in Patients with Electronic Implant Devices. PACE (ICPES2011, P189)34(11), 1443-44.
  112. Sakkalis, V. (2011). Review of Advanced Techniques for the estimation of Brain Connectivity measured with EEG/MEG. Computers in Biology and Medicine, 2011.
  113. Erturkmen, G.L., Dogac, A., Yuksel, M., Arbelo, E., Hinterbuchner, L., Chronaki, C., & Eichelberg, M. (2011). The Personalized Remote Monitoring of the Atrial Fibrillation Patients with Electronic Implant Devices. Journal of Health Engineering2(2).
  114. Santana, S.M.V., Lausen, B., Bujnowska-Fedak, M., Chronaki, C., Kummervold, P.E., Rasmussen, J., & Sørensen, T. (2010).  Online Communication Between Doctors and Patients in Europe: Status and Perspectives. , 12(2), e20.
  115. Brochhausen, M., Grigonyte, G., Martin, L., Graf, N., Haller, J., Smith, B., & Tsiknakis, M.N. (2010).  The ACGT Master Ontology and its applications – Towards an ontology-driven cancer research and management system.
  116. Sakkalis, V., Cassar, T., Zervakis, M.E., Giurcaneanu, C.D., Bigan, C., Micheloyannis, S., Camilleri, K.P., Fabri, S.G., Tsiaras, V., Karakonstantaki, E., & Michalopoulos, K. (2010). A Decision Support Framework for the Diagnosis of Children with Mild Epilepsy based on EEG Analysis. Journal of Neuroengineering and Rehabilitation7(24).
  117. Hunter, P., Coveney, P.V., de Bono, B., Diaz, V., Fenner, J., Frangi, A.F., Harris, P., Hose, R., Kohl, P., Lawford, P., McCormack, K., Mendes, M., Omholt, S., Quarteroni, A., Skar, J., Tegner, J., Randall, S.Th., Tollis, I.G., Tsamardinos, I., van Beek, J.H.G.M., & Viceconti, M. (2010). A vision and strategy for the virtual physiological human in 2010 and beyond. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences368(1920), 2595-2614, (1364-503X; 1364-503X).
  118. Zampetakis, L.A., & Moustakis, V.A. (2010). An exploratory research on the factors stimulating corporate entrepreneurship in the Greek public sector. International Journal of Manpower31(8), 871-887.
  119. Papamanthou, Ch., & Tollis, I.G. (2010). Applications of Parameterized st-Orientations. Journal of Graph Algorithms and Applications14(2), 337-365.
  120. Sfakianakis, S.G., Blazadonakis, M.E., Dimou, I.N., Zervakis, M.E., Tsiknakis, M.N., Potamias, G.A., Kafetzopoulos, D., & Lowe, D. (2010). Decision Support Based on Genomics: Integration of Data and Knowledge Driven Reasoning. International Journal of Biomedical Engineering and Technology 3(3/4), 287-307.
  121. Chiarugi, F., Colantonio, S., Emmanouilidou, D., Martinelli, M., Moroni, D., & Salvetti, O. (2010). Decision support in heart failure through processing of electro- and echocardiograms . Artificial Intelligence in Medicine50(2), 95-104.
  122. Roniotis, A., Marias, K., Sakkalis, V., & Zervakis, M.E. (2010). Diffusive Modelling of Glioma Evolution: A review. Journal of Biomedical Science and Engineering, Scientific Research3(5), 501-508.
  123. Skounakis, E., Farmaki, C., Sakkalis, V., Roniotis, A., Banitsas, K., Graf, N., & Marias, K. (2010). DoctorEye: A clinically driven multifunctional platform, for accurate processing of tumors in medical images. Intelligent signal and image processing in eHealth - The Open Medical Informatics Journal4, 105-115.
  124. Sakkalis, V., Tsiaras, V., & Tollis, I.G. (2010). Graph Analysis and Visualization for Brain Function Characterization using EEG Data. Journal of Healthcare Engineering1(3), 435-460.
  125. Trigo, J.D., Chiarugi, F., Alesanco, Á., Martínez-Espronceda, M., Serrano, L., Chronaki, C., Escayola, J., Martínez, I., & García, J. (2010). Interoperability in Digital Electocardiography: Harmonization of ISO/IEEE x73-PHD and SCP-ECG IEEE Transactions on Information Technology in Biomedicine14(6), 1303-17.
  126. Aliferis, C.F., Statnikov, A.R., Tsamardinos, I., Mani, S., & Koutsoukos, X.D. (2010). Local Causal and Markov Blanket Induction for Causal Discovery and Feature Selection for Classification Part I: Algorithms and Empirical Evaluation. Journal of Machine Learning Research11, 171-234.
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  128. Gkirtzou, K., Tsamardinos, I., Tsakalides, P., & Poirazi, P. (2010). MatureBayes: A probabilistic algorithm for identifying the mature miRNA within novel precursors. PLoS ONE5(8), e11843, (1932-6203; 1932-6203).
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  130. Zampetakis, L.A., & Moustakis, V.A. (2010). Quantifying uncertainty in ranking problems with composite indicators: A Bayesian approach. Journal of Modeling in Management5(1), 63-80.
  131. Kanterakis, A., Potamias, G.A., Zacharioudakis, G., Koumakis, L., Sfakianakis, S.G., & Tsiknakis, M.N. (2010). Scientific discovery workflows in bioinformatics: a scenario for the coupling of molecular regulatory pathways and gene-expression profiles. Stud Health Technol Inform160, 1304-1308.
  132. Farmaki, C., Marias, K., Sakkalis, V., & Graf, N. (2010). Spatially adaptive active contours: A semi-automatic tumor segmentation technique. International journal of computer assisted radiology and surgery 5(4), 369-84.
  133. Lagani, V., & Tsamardinos, I. (2010). Structure-Based Variable Selection for Survival Data. Bioinformatics 201026(15), 1887-1894.
  134. Vourvahakis, D., Chronaki, C., Kontogiannis, V., Panagopoulos, D., & Stergiopoulos, S. (2010). Traffic Accidents in Crete (1996-2006): the Role of the Emergency Coordination Center. .
  135. Zampetakis, L.A., Beldekos, P., & Moustakis, V.A. (2009). "Day-to-day" entrepreneurship within organisations: The role of trait Emotional Intelligence and Perceived Organisational Support. European Management Journal27(3), 165-175, (02632373).
  136. Graf, N., Hoppe, A., Georgiadi, E., Belleman, R., Desmedt, C., Dionysiou, D.D., Erdt, M., Jacques, J., Kolokotroni, E., Lunzer, A., Tsiknakis, M.N., & Stamatakos, G.S. (2009). "In silico" oncology for clinical decision making in the context of nephroblastoma. Klinische Pädiatrie221(3), 141-149, (14393824).
  137. Politis, Y., Litos, Ch., Grigoroudis, E., & Moustakis, V.A. (2009). A business excellence model for the hotel sector: Implementation to high-class Greek hotels. Benchmarking16(4), 462-483, (14635771).
  138. Tsironis, L., Anastasiou, K., & Moustakis, V.A. (2009). A framework for BPML assessment and improvement: A case study using IDEF0 and eEPC. Business Process Management Journal15(3), 430-461, (14637154).
  139. Sakkalis, V., Doru, G.C., Xanthopoulos, P., Zervakis, M.E., Tsiaras, V., Yang, Y., Karakonstantaki, E., & Micheloyannis, S. (2009). Assessment of linear and nonlinear synchronization measures for analyzing EEG in a mild epileptic paradigm. IEEE Transactions on Information Technology in Biomedicine13(4), 433-441, (10897771).
  140. Tzamali, E., Poirazi, P., Tollis, I.G., & Reczko, M. (2009). Computational Identification of Bacterial Communities. International Journal of Biological and Life Sciences1(4), 185-191.
  141. Tsiaras, V., Triantafillou, S., & Tollis, I.G. (2009). Dagmaps: Space filling visualization of directed acyclic graphs. J. Graph Algorithms Appl.13(3), 319-347.
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  146. Zervakis, M.E., Blazadonakis, M.E., Tsiliki, G., Danilatou, V., Tsiknakis, M.N., & Kafetzopoulos, D. (2009). Outcome prediction based on microarray analysis: A critical perspective on methods. BMC Bioinformatics10, (14712105).
  147. Oulas, A., Boutla, A., Gkirtzou, K., Reczko, M., Kalantidis, K., & Poirazi, P. (2009). Prediction of novel microRNA genes in cancer-associated genomic regions - A combined computational and experimental approach. Nucleic acids research37(10), 3276-3287, (03051048).
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  149. Ktonas, P.Y., Golemati, S., Xanthopoulos, P., Sakkalis, V., Ortigueira, M.D., Tsekou, H., Zervakis, M.E., Paparrigopoulos, T., Bonakis, A., Economou, N.T., Theodoropoulos, P., Papageorgiou, S.G., Vassilopoulos, D., & Soldatos, C.R. (2009). Time-frequency analysis methods to quantify the time-varying microstructure of sleep EEG spindles: Possibility for dementia biomarkers?. Journal of neuroscience methods185(1), 133-142, (01650270).
  150. Lakiotaki, K., Delias, P., Sakkalis, V., & Matsatsinis, N.F. (2009). User profiling based on multi-criteria analysis: The role of utility functions. Operational Research9(1), 3-16, (11092858).
  151. Roumeliotaki, T., & Chronaki, C. (2009). Using the internet for health purposes: Perceptions and attitudes of Greeks in the 15-35 years age group. Archives of Hellenic Medicine26(2), 246-256, (11053992).
  152. Ruping, S., Wegener, D., Sfakianakis, S.G., & Sengstag, T. (2009). Workflows for intelligent monitoring using proxy services. Studies in health technology and informatics147, 277-282, Netherlands (0926-9630; 0926-9630).
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  154. Zampetakis, L.A., Moustakis, V.A., Dewett, T., & Zampetakis, K. (2008). A longitudinal analysis of student creativity scripts. Journal of Creative Behavior42(4), 237-254, (00220175).
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                  Found: 274 publications
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