ICS Publications - CBML

Conferences (166)

    Papers in Proceedings (full-paper reviewed)

  1. Kazantzaki, E., Koumakis, L., Kondylakis, H., Renzi, C., Fioretti, C., Mazzocco, K., Marias, K., Tsiknakis, M.N., & Pravettoni, G (2017). Current trends in Electronic Family Resilience Tools: Implementing a tool for the cancer domain. EMBEC & NBC 2017 Part of the IFMBE Proceedings book series (IFMBE), 06/11/2017 (vol. 65, pp. 29-32). Springer, Singapore doi: 10.1007/978-981-10-5122-7_8.
  2. Pampouchidou, A., Simantiraki, O., Vazakopoulou, C.-M., Marias, K., Simos, P.G., Yang, F., Meriaudeau, F., & Tsiknakis, M.N. (2017). Détection de la dépression par l’analyse de la géométrie faciale et de la parole. GRETSI XXVIème colloque, 8/9/2017. Juan-Les-Pins, France: GRETSI.
  3. Pampouchidou, A., Simantiraki, O., Vazakopoulou, C.-M., Chatzaki, C, Pediaditis, M., Maridaki, A., Marias, K., Simos, P.G., Yang, F., Meriaudeau, F., & Tsiknakis, M.N. (2017). Facial Geometry and Speech Analysis for Depression Detection. 39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC'17), 12/8/2017. Jeju Island, Korea: IEEE.
  4. Simantiraki, O., Charonyktakis, P., Pampouchidou, A., Tsiknakis, M.N., & Cooke, M. (2017). Glottal Source Features for Automatic Speech-based Depression Assessment. INTERSPEECH 2017, Stockholm, Sweden, 23/8/2017.
  5. Kondylakis, H., Bucur, A., Dong, F., Renzi, C., Manfrinati, A., Graf, N., Hoffman, S., Koumakis, L., Pravettoni, G, Marias, K., Tsiknakis, M.N., & Kiefer, S. (2017). iManageCancer: Developing a platform for Empowering patients and strengthening self-management in cancer diseases. 30th IEEE International Symposium on Computer-Based Medical Systems - IEEE CBMS, Thessaloniki, Greece, 22-24 June 2017. IEEE.
  6. Spanakis, C., Mathioudakis, E., Kampanis, N.A., Tsiknakis, M.N., & Marias, K. (2016). A new approach in image registration. 2016 IEEE International Conference on Imaging Systems and Techniques (IST), Chania, Greece, 10 November 2016 (pp. 449-453). IEEE ( http://ieeexplore.ieee.org/document/7738268/), doi: 10.1109/IST.2016.7738268.
  7. Spanakis, M., Spanakis, E.G., Kondylakis, H., Sfakianakis, S.G., Genitsaridi , I., Sakkalis, V., Tsiknakis, M.N., & Marias, K. (2016). Addressing drug-drug and drug-food interactions through personalized empowerment services for healthcare. 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC 2016).
  8. Pampouchidou, A., Pediaditis, M., Chiarugi, F., Marias, K., Simos, P.G., Yang, F., Meriaudeau, F., & Tsiknakis, M.N. (2016). Automated Characterization of Mouth Activity for Stress and Anxiety Assessment. IEEE International Conference on Imaging Systems & Techniques, Chania, Crete, Greece, October 4-6, 2016.
  9. Koumakis, L., Kondylakis, H., Chatzimina, M., Iatraki, G., Argyropaidas, P., Kazantzaki, E., Tsiknakis, M.N., Kiefer, S., & Marias, K. (2016). Designing smart analytical data services for a personal health framework. 13th International Conference on Wearable, Micro & Nano Technologies for Personalized Health (pHealth).
  10. Kazantzaki, E., Kondylakis, H., Koumakis, L., Marias, K., Tsiknakis, M.N., Gorini, A., Mazzocco, K., Renzi, C., Fioretti, C., & Pravettoni, G (2016). Gabriella Pravettoni, Psycho-emotional tools for better treatment adherence and therapeutic outcomes for cancer patients. 13th International Conference on Wearable, Micro & Nano Technologies for Personalized Health (pHealth).
  11. Pampouchidou, A., Kazantzaki, E., Karatzanis, I., Marias, K., Tsiknakis, M.N., Meriaudeau, F., Yang, F., & Simos, P.G. (2016). Preliminary Evaluation of a Web-Oriented Assessment Tool for Emotion Recognition. 13th International Conference on Wearable, Micro & Nano Technologies for Personalized Health, May 29 – 31, 2016, Heraklion, Crete, Greece, May 30, 2016 (pp. 95-100). IOS Press (http://ebooks.iospress.nl/publication/42862), doi: 10.3233/978-1-61499-653-8-95.
  12. Simantiraki, O., Giannakakis, G., Pampouchidou, A., & Tsiknakis, M.N. (2016). Stress Detection from Speech Using Spectral Slope Measurements. 6th EAI International Symposium on Pervasive Computing Paradigms for Mental Health , Barcelona, Spain, November 28, 2016. EAI.
  13. Pampouchidou, A., Marias, K., Tsiknakis, M.N., Simos, P.G., Yang, F., Lemaitre, G., & Meriaudeau, F. (2016). Video-Based Depression Detection Using Local Curvelet Binary Patterns in Pairwise Orthogonal Planes . 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, Orlando, Florida, USA, August 16 – 20, 2016. IEEE.
  14. Giannakakis, G., Pediaditis, M., Stavrinidis, G., Konstantinidis, G., Kritsotakis, V., Tsakanikas, V., Ligerakis, M., Sakkalis, V., Vorgia, P., & Tsiknakis, M.N. (2016). Α computational platform for continuous seizure anticipitation monitoring and clinical evaluation. 13th International Conference on Wearable, Micro and Nano Technologies for Personalized Health.
  15. Koumakis, L., Potamias, G.A., Marias, K., & Tsiknakis, M.N. (2015). An algorithmic approach for the effect of transcription factor binding sites over functional gene regulatory networks. Bioinformatics and Bioengineering (BIBE), 2015 IEEE 15th International Conference 2-4 Nov. 2015, (pp. 1-6).
  16. Genitsaridi , I., Tsiknakis, M.N., & Marias, K. (2015). An Ontological Approach Towards Psychological Patient Profiling in Pervasive Computing Environments: A case study on Breast Cancer Patients.. 8th ACM International Conference on PErvasive Technologies Related to Assistive Environments, July 1-3, 2015 Corfu, Greece (PETRA 2015 ).
  17. Pampouchidou, A., Marias, K., Tsiknakis, M.N., Simos, P.G., Yang, F., & Meriaudeau, F. (2015). Designing a Framework for Assisting Depression Severity Assessment from Facial Image Analysis. IEEE International Conference on Signal and Image Processing Applications. Kuala Lumpur, Malaysia, October 2015 .
  18. Thermolia, C., Bei, E. S., Petrakis, E.G.M., Kritsotakis, V., Tsiknakis, M.N., & Sakkalis, V. (2015). Designing A Patient Monitoring System for Bipolar Disorder Using Semantic Web Technologies. 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC 2015), Milano, Italy, August 25-29 2015.
  19. Giannakakis, G., Grigoriadis, D., & Tsiknakis, M.N. (2015). Detection of stress/anxiety state from EEG features during video watching. 37th Annual International Conference of the IEEE Engineering in Medicine and Biology, Milano, Italy, 25-29 August 2015.
  20. Kondylakis, H., Spanakis, E.G., Sfakianakis, S.G., Sakkalis, V., Tsiknakis, M.N., Marias, K., Xia, Z, Yu, H.Q., & Dong, F. (2015). Digital Patient: Personalized and Translational Data Management through the MyHealthAvatar EU Project. International Conference of the IEEE Engineering in Medicine and Biology Society of the IEEE Engineering in Medicine and Biology Society (EMBC), 2015, Milan, Italy.
  21. Pediaditis, M., Giannakakis, G., Chiarugi, F., Manousos, D., Pampouchidou, A., Christinaki, E., Iatraki, G., Kazantzaki, E., Simos, P.G., Marias, K., & Tsiknakis, M.N. (2015). Extraction of facial features as indicators of stress and anxiety. 37th Annual International Conference of the IEEE EMBS, Milan, Italy, August 2015..
  22. Kondylakis, H., Flouris, G., Fundulaki, I., Papakonstantinou, V., & Tsiknakis, M.N. (2015). Flexible Access to Patient Data through e-Consent. In Proceedings of the 5th EAI International Conference on Wireless Mobile Communication and Healthcare - “Transforming healthcare through innovations in mobile and wireless technologies” (MOBIHEALTH-15), London, Great Britain, 14–16 October. (pdf).
  23. Giannakakis, G., Vorgia, P., Voutoufianakis, S., Pediaditis, M., Champsas, D., & Tsiknakis, M.N. (2015). Low frequency preictal EEG waves preceding epileptic seizures originating from right frontal lobe. 31st International Epilepsy Congress (IEC), Istanbul, 5-9 September 2015.
  24. Kondylakis, H., Koumakis, L., Kazantzaki, E., Chatzimina, M., Psaraki, M., Marias, K., & Tsiknakis, M.N. (2015). Patient Empowerment through Personal Medical Recommendations. Health and Biomedical Informatics (MEDINFO), 216, 1117, 2015, Sao Paolo, Brazil, 2015.
  25. Kondylakis, H., Koumakis, L., Psaraki, M., Troullinou, G., Chatzimina, M., Kazantzaki, E., Marias, K., & Tsiknakis, M.N. (2015). Semantically-enabled Personal Medical Information Recommender. in Proceedings of the ISWC 2015 Posters & Demonstrations Track co-located with the 14th International Semantic Web Conference (ISWC-2015), Bethlehem, PA, USA, 11-15 October.
  26. Karatzanis, I., Iliopoulos, A., Tsiknakis, M.N., Sakkalis, V., & Marias, K. (2014). A collaborative central reviewing platform for cancer detection in digital microscopy images. 6th International Advanced Research Workshop on In Silico Oncology and Cancer Investigation-The CHIC Project Workshop, IARWISOCI, Athens, Greece, November 3-4, 2014. http://doi.org/10.1109/IARWISOCI.2014.7034639.
  27. Koumakis, L., Potamias, G.A., Sfakianakis, S.G., Moustakis, V.A., Zervakis, M.E., Graf, N., & Tsiknakis, M.N. (2014). miRNA based pathway analysis tool in nephroblastoma as a proof of principle for other cancer domains. IEEE 14th International Conference on Bioinformatics and Bioengineering (BIBE 2014). Boca Raton, USA.
  28. Manikis, G., Maniadi, E., Tsiknakis, M.N., & Marias, K. (2014). Multi-Modal Medical Data Analysis Platform (3MDAP) for analysis and predictive modelling of cancer trial data. 6th International Advanced Research Workshop on In Silico Oncology and Cancer Investigation.
  29. Sfakianaki, P., Koumakis, L., Sfakianakis, S.G., & Tsiknakis, M.N. (2014). Natural Language Processing for Biomedical Tools Discovery: A Feasibility Study and Preliminary Results. Business Information Systems: 17th International Conference, BIS 2014, Larnaca, Cyprus, May 22-23, 2014, (vol. 178, pp. 134).
  30. Christinaki, E., Giannakakis, G., Chiarugi, F., Pediaditis, M., Iatraki, G., Manousos, D., Marias, K., & Tsiknakis, M.N. (2014). Comparison of blind source separation algorithms for optical heart rate monitoring . 4th International Conference on Wireless Mobile Communication and Healthcare, Athens, Greece, November 3-5, 2014.
  31. Manousos, D., Iatraki, G., Christinaki, E., Pediaditis, M., Chiarugi, F., Tsiknakis, M.N., & Marias, K. (2014). Contactless detection of facial signs related to stress: a preliminary study. 4th International Conference on Wireless Mobile Communication and Healthcare, Athens, Greece, November 3-5, 2014.
  32. Chiarugi, F., Iatraki, G., Christinaki, E., Manousos, D., Giannakakis, G., Pediaditis, M., Pampouchidou, A., Marias, K., & Tsiknakis, M.N. (2014). Facial signs and psycho-physical status estimation for well-being assessment. 7th IEEE International Conference on Health Informatics.
  33. Spanakis, E.G., Yang, P., Deng, Z., Sakkalis, V., Kafetzopoulos, D., Marias, K., Tsiknakis, M.N., & Dong, F. (2014). MyHealthAvatar: personalized and empowerment health services through Internet of Things technologies . 4th International Conference on Wireless Mobile Communication and Healthcare, Athens, Greece, November 3-5, 2014.
  34. Kondylakis, H., Koumakis, L., Ruping, S., Kazantzaki, E., Marias, K., & Tsiknakis, M.N. (2014). PMIR: A Personal Medical Information Recommender. Medical Informatics Europe (MIE).
  35. Antonakakis, M., Giannakakis, G., Tsiknakis, M.N., Micheloyannis, S., & Zervakis, M.E. (2013). Synchronization coupling investigation using ICA cluster analysis in resting MEG signals in reading difficulties13th IEEE International Conference on Bioinformatics and Bioengineering, Chania, Greece, 10-13 November 2013.
  36. Chiarugi, F., Christinaki, E., Colantonio, S., Marraccini, P., Pediaditis, M., Salvetti, O., & Tsiknakis, M.N. (2013). A Virtual Individual’s Model Based on Facial Expression Analysis: a Non-Intrusive Approach for Wellbeing Monitoring and Self- Management. 13th IEEE International Conference on BioInformatics and BioEngineering.
  37. Sakkalis, V., Giannakakis, G., Farmaki, C., Mousas, A., Pediaditis, M., Vorgia, P., & Tsiknakis, M.N. (2013). Absence seizure epilepsy detection using linear and nonlinear EEG analysis methods. 35th Annual International Conference of the IEEE Engineering in Medicine and Biology.
  38. Giannakakis, G., Sakkalis, V., Pediaditis, M., Farmaki, C., Vorgia, P., & Tsiknakis, M.N. (2013). An approach to absence epileptic seizures detection using approximate entropy. 35th Annual International Conference of the IEEE Engineering in Medicine and Biology.
  39. Maniadi, E., Kondylakis, H., Spanakis, E.G., Spanakis, M., Tsiknakis, M.N., Marias, K., & Dong, F. (2013). Designing a digital patient avatar in the context of the MyHealthAvatar project initiative. 13th IEEE International Conference on BioInformatics and BioEngineering (BIBE) 2013.
  40. Vavoulas, G., Pediaditis, M., Spanakis, E.G., & Tsiknakis, M.N. (2013). The MobiFall Dataset: An Initial Evaluation of Fall Detection Algorithms Using Smartphones. 6th IEEE International Symposium on Monitoring & Surveillance Research (ISMSR): Healthcare-Bioinformatics.
  41. Vorgia, P., Giannakakis, G., Sakkalis, V., Pediaditis, M., Farmaki, C., Voutoufianakis, S., & Tsiknakis, M.N. (2013). Ανίχνευση αφαιρέσεων με χρήση προσεγγιστικής εντροπίας. του 8ου Πανελλήνιου Συνεδρίου Επιληψίας.
  42. Tsiknakis, M.N., Sfakianakis, S.G., Marias, K., & Graf, N. (2012). A technical infrastructure to support personalized medicine. IEEE 12th International Conference on Bioinformatics & Bioengineering (BIBE), 2012.
  43. Kondylakis, H., & Tsiknakis, M.N. (2012). Computerized Clinical Guidelines: Current Status & Directions for Future Research. Medical Informatics Europe (MIE), Italy, Pisa, 2012, (pp. 432-436).
  44. Spanakis, E.G., & Tsiknakis, M.N. (2012). Delivery of secure eHealth services and communications. International Conference on Telecommunication Systems, Modeling and Analysis (ICTSM2012), Prague, Czech Republic, May 24-26, 2012.
  45. Pediaditis, M., Tsiknakis, M.N., Kritsotakis, V., Góralczyk, M., Voutoufianakis, S., & Vorgia, P. (2012). Exploiting Advanced Video Analysis Technologies for a Smart Home Monitoring Platform for Epileptic Patients: Technological and Legal Preconditions. International Conference on Telecommunications and Multimedia (TEMU ) 2012 .
  46. Vorgia, P., Pediaditis, M., Kritsotakis, V., Dimitriou, H., Tsiknakis, M.N., Voutoufianakis, S., Danilatou, V., Kafetzopoulos, D., & Fotiadis, D.I. (2012). HERCULES: Developing an integrated health care scheme, based on biomedical genetics, advanced biomedical informatics and computer vision for early diagnosis, monitoring and treatment of children with neurological disorders in Greece. Pilot application in absence like seizures. 10th European Congress on Epileptology.
  47. Kondylakis, H., Koumakis, L., Genitsaridi , I., Tsiknakis, M.N., Marias, K., Pravettoni, G, Gorini, A., & Mazzocco, K. (2012). IEmS: A collaborative Environment for Patient Empowerment. IEEE International Conference on BioInformatics and BioEngineering (BIBE), 2012.
  48. Pediaditis, M., Tsiknakis, M.N., Koumakis, L., Karachaliou, M., Voutoufianakis, S., & Vorgia, P. (2012). Vision-Based Absence Seizure Detection. 34th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC'12 San Diego, California, USA on August 28 - September 1, 2012.
  49. Martin, L., Anguita, A., Graf, N., Tsiknakis, M.N., Brochhausen, M., Ruping, S., Bucur, A., Sfakianakis, S.G., Sengstag, T., Buffa, F., & Stenzhorn, H. (2011). ACGT: Advancing Clinico-genomic trials on cancer - Four years of experience. MIE 2011, Oslo, Norway, August 2011, Stud Health Technol Inform..
  50. Marias, K., Stamatakos, G.S., Dionysiou, D.D., Sakkalis, V., Sfakianakis, S.G., & Tsiknakis, M.N. (2011). Computational Services for in silico Oncology: Experiences and Research Challenges. 7th GRACM International Congress on Computational Mechanics, Athens, Greece, 30 June – 2 July, 2011..
  51. Hristoskova, A., Sakkalis, V., Zacharioudakis, G., Tsiknakis, M.N., & De Turc, F. (2011). Ontology-driven Monitoring of Patient Vital Signs enabling Personalized Medical Detection and Alert. 2nd International ICST Conference on Wireless Mobile Communication and Healthcare (MobiHealth 2011), Kos Island, Greece, 5-7 October, 2011.
  52. Bucur, A., Ruping, S., Sengstag, T., Sfakianakis, S.G., Tsiknakis, M.N., & Wegener, D. (2011). The ACGT project in retrospect: Lessons learned and future outlook. Procedia Computer Science, 4:1119 - 1128, 2011. Proceedings of the International Conference on Computational Science, ICCS 2011, Japan, June 2011.
  53. Tsiknakis, M.N., Sfakianakis, S.G., Zacharioudakis, G., & Koumakis, L. (2010). A framework supporting sharing and reuse of data and tools in translational cancer research: Lessons learned for VPH research. 4th International Advanced Research Workshop on In Silico Oncology and Cancer Investigation (IARWISO), Athens, Greece, September 2010.
  54. Martin, L., Anguita, A., Graf, N., Tsiknakis, M.N., Brochhausen, M., Rueping, S., Bucur, A., Sfakianakis, S.G., & Stenzhorn, H. (2010). ACGT: Advancing Clinico-genomic trials on cancer – Four years of experience. AMIA 2010 Annual Symposium, Washington DC, Washington DC, 13-15 November 2010.
  55. Tsiknakis, M.N., & Spanakis, E.G. (2010). Adoption of innovative eHealth services in prehospital emergency management: a case study. 10th IEEE International Conference on Information Technology and Applications in Biomedicine (ITAB 2010),  Corfu, Greece.
  56. Koumakis, L., Kanterakis, A., Potamias, G.A., Sfakianakis, S.G., Zacharioudakis, G., & Tsiknakis, M.N. (2010). Analyzing gene regulatory networks and gene expression profiles via scientific workflows. International Conference on Biomedical Data & Knowledge Mining: Towards Biomarker Discovery, Chania, Greece, 7-9 July 2010.
  57. Grigonyte, G., Brochhausen, M., Martin, L., Tsiknakis, M.N., & Haller, J. (2010). Evaluating Ontologies with NLP-Based Terminologies – A Case Study on ACGT and Its Master Ontology. 6th International Conference on Formal Ontology in Information Systems (FOIS), Toronto, Canada, May 11-14.
  58. Sfakianakis, S.G., Zervakis, M.E., Tsiknakis, M.N., & Kafetzopoulos, D. (2010). Integration of Biological Knowledge in the Mixture-of-Gaussians Analysis of Genomic Clustering. 10th IEEE International Conference on Information Technology and Applications in Biomedicine (ITAB 2010), Corfu, Greece, Nov 2010.
  59. Kanterakis, A., Zacharioudakis, G., Koumakis, L., Potamias, G.A., Sfakianakis, S.G., & Tsiknakis, M.N. (2010). Scientific discovery workflows in bioinformatics: A scenario for the coupling of molecular regulatory pathways and gene-expression profiles. 13th International Congress on Medical Informatics (MEDINFO 2010), South Africa, 12 - 15 of September 2010.
  60. Stamatakos, G.S., Dionysiou, D.D., Kolokotroni, E., Georgiadi, E., Giatili, S., Hoppe, A., Desmedt, C., Lunzer, A., Erdt, M., Jacques, J., Dong, F., Belleman, R., Melis, P., d Onofrio, A., Buffa, F., Claerhout, B., Rueping, S., Marias, K., Tsiknakis, M.N., & Graf, N. (2010). The ACGT Oncosimulator: from Conceptualization Towards Development via Multiscale Cancer Modeling. 4th International Advanced Research Workshop on In Silico Oncology and Cancer Investigation, Athens, Greece, September 8-9.
  61. Danilatou, V., Vorgia, P., Pediaditis, M., Tsiknakis, M.N., Fotiadis, D.I., & Kafetzopoulos, D. (2010). The emerging concept of blood genomic profiling in childhood epilepsy. IEEE 10th Int. Conference on Information Technology and Application in Biomededicine.
  62. Stenzhorn, H., Weiler, G., Brochhausen, M., Schera, F., Kritsotakis, V., Tsiknakis, M.N., Kiefer, S., & Graf, N. (2010). The ObTiMA System – Ontology-based Managing of Clinical Trials. 13th International Congress on Medical Informatics (MEDINFO 2010), South Africa, 12 - 15 of September 2010.
  63. Pediaditis, M., Tsiknakis, M.N., Vorgia, P., Kafetzopoulos, D., Danilatou, V., & Fotiadis, D.I. (2010). Vision-Based Human Motion Analysis in Epilepsy – Methods and Challenges. 10th IEEE International Conference on Information Technology and Applications in Biomedicine (ITAB 2010), Corfu, Greece, Nov 2010.
  64. Zacharioudakis, G., Koumakis, L., Sfakianakis, S.G., & Tsiknakis, M.N. (2009). A semantic infrastructure for the integration of bioinformatics services. 9th International Conference on Intelligent Systems Design and Applications, ISDA 2009, Pisa, 30 November 2009 through 2 December 2009 (pp. 367-372). (9780769538723 (ISBN)).
  65. Tsiknakis, M.N., Sfakianakis, S.G., Zacharioudakis, G., Koumakis, L., Kanterakis, A., Potamias, G.A., & Kafetzopoulos, D. (2009). A semantically aware platform for the authoring and secure enactment of bioinformatics workflows. 31st Annual International IEEE EMBS Conference (EMBC2009). September, 2-6, 2009, Hilton Minneapolis, Minnesota, USA.
  66. Tsiliki, G., Zervakis, M.E., Ioannou, M., Sanidas, E., Stathopoulos, E., Tsiknakis, M.N., & Kafetzopoulos, D. (2009). Multi-platform data integration in microarray analysis. 9th International Conference on Information Technology and Applications in Biomedicine, ITAB 2009, Larnaca, 4 November 2009 through 7 November 2009. (9781424453795 (ISBN)).
  67. Koumakis, L., Moustakis, V.A., Tsiknakis, M.N., Kafetzopoulos, D., & Potamias, G.A. (2009). Supporting Genotype-To-Phenotype Association Studies with Grid-Enabled Knowledge Discovery Workflows. 31st Annual International IEEE EMBS Conference (EMBC2009). September, 2-6, 2009, Hilton Minneapolis, Minnesota, USA.
  68. Sfakianakis, S.G., Koumakis, L., Zacharioudakis, G., & Tsiknakis, M.N. (2009). Web-based authoring and secure enactment of bioinformatics workflows. 2009 Workshops at the Grid and Pervasive Computing Conference, GPC 2009, Geneva, 4 May 2009 through 8 May 2009 (pp. 88-95). (9780769536774 (ISBN)).
  69. Christodoulou, E., Ioannou, M., Kafousi, M., Sanidas, E., Papagiannakis, G., Danilatou, V., Tsiliki, G., Margaritis, Th., Kondylakis, H., Manakanatas, D., Koumakis, L., Kanterakis, A., Vassilaros, S., Tsiknakis, M.N., Analyti, A., Potamias, G.A., Tsiftsis, D., Stathopoulos, E., & Kafetzopoulos, D. (2008). A new gene expression signature related to breast cancer estrogen receptor statusBIBE 2008. 8th IEEE International Conference on BioInformatics and BioEngineering, Greece, October (pp. 1-7). (pdf).
  70. Tsiknakis, M.N., Sfakianakis, S.G., Rueping, S., Trelles, O., Siestang, Th., Claerhout, B., & Virvilis, V. (2008). A semantic grid services architecture in support of efficient knowledge discovery from multilevel clinical and genomic datasets. 1st International Conference on Health Informatics, HEALTHINF 2008, Funchal, Madeira, 28 January 2008 through 31 January 2008 (vol. 1, pp. 279-287). (9789898111166 (ISBN)).
  71. Kalaitzakis, M., Kritsotakis, V., Kondylakis, H., Potamias, G.A., Tsiknakis, M.N., & Kafetzopoulos, D. (2008). An Integrated Clinico-Proteomics Information Management and Analysis PlatformProceedings of the Twenty-First IEEE International Symposium on Computer-Based Medical Systems, Finland, June 17-19 (pp. 218-220). (pdf).
  72. Anguita, A., Martin, L., Crespo, J., & Tsiknakis, M.N. (2008). An ontology based method to solve query identifier heterogeneity in post-genomic clinical trials. (vol. 136, pp. 3-8). (09269630).
  73. Brochhausen, M., Weiler, G., Martin, L., Cocos, C., Stenzhorn, H., Graf, N., Doerr, M., Tsiknakis, M.N., & Smith, B. (2008). Applications of the ACGT Master Ontology on CancerOTM Workshops, Monterrey, Mexico, 9-14th November (pp. 1046-1055).
  74. Pérez-Pérez, M.M., Kaforou, S., Mery, S., Brunet-Errand, L., Paulus, C., Kritsotakis, M., Gerfault, L., Reina, C., Kafetzopoulos, D., Potamias, G.A., Ricoul, F., Tsiknakis, M.N., Schnekenburger, J., & Grangeat, P. (2008). LOCCANDIA: Lab-on-Chip Based Protein Profiling for Cancer Diagnosis. 5th pHealth Workshop on wearable micro and nano systems for personalised health "from research into practice", Valencia, Spain, 21-23 May.
  75. Martin, L., Anguita, A., Maojo, V., Bonsma, E., Bucur, A., Vrijnsen, J., Brochhausen, M., Cocos, C., Stenzhorn, H., Tsiknakis, M.N., Doerr, M., & Kondylakis, H. (2008). Ontology based integration of distributed and heterogeneous data sources in ACGT. 1st International Conference on Health Informatics, HEALTHINF 2008, Funchal, Madeira, 28 January 2008 through 31 January 2008 (vol. 1, pp. 301-306). (9789898111166 (ISBN)), (pdf).
  76. Zervakis, M.E., Blazadonakis, M.E., Banti, A., Kafetzopoulos, D., Danilatou, V., & Tsiknakis, M.N. (2008). Performance validation of microarray analysis methods. Proceedings of the 8th IEEE International Conference on Bioinformatics and Bioengineering, BIBE 2008, Athens, Greece, October 8-10 (pp. 1-6).
  77. Kalaitzakis, M., Kritsotakis, V., Grangeat, P., Paulus, C., Gerfault, L., Perez, M., Reina, C., Potamias, G.A., Tsiknakis, M.N., Kafetzopoulos, D., & Binz, P.A. (2008). Proteomic based identification of cancer biomarkers: The LOCCANDIA integrated platformBioInformatics and BioEngineering, 2008. In proceedings of the 8th IEEE International Conference on BioInformatics and BioEngineering (IEEE BIBE 2008), Athens, Greece, 8-10 October (pp. 1-7).
  78. Brochhausen, M., Weiler, G., Cocos, C., Stenzhorn, H., Graf, N., Doerr, M., & Tsiknakis, M.N. (2008). The ACGT Master Ontology on Cancer A New Terminology Source for Oncological Practice. CBMS, Jyväskylä, Finland, June 17-19 (pp. 324-329). (pdf).
  79. Tsiknakis, M.N. (2008). The european cancer informatics landscape: Challenges for the biomedical informatics community. 8th IEEE International Conference on BioInformatics and BioEngineering, BIBE 2008, Athens, 8 October 2008 through 10 October 2008. (9781424428458 (ISBN)).
  80. Potamias, G.A., Tsiknakis, M.N., Kafetzopoulos, D., Pérez-Pérez, M.M., Jordan, B., Binz, P.A., Lisacek, F., Kritsotakis, V., Manakanatas, D., Kondylakis, H., Kalaitzakis, M., Gerfault, L., Paulus, C., & Grangeat, P. (2007). The Loccandia Integrated Clinico-Proteomics Environment. In Proceedings of the 5th International Conference on Instrumental Methods of Analysis - Modern Trends and Applications (IMA '07), Rio, Patras, Greece, 30 September - 4 October.
  81. Tsiknakis, M.N., Sfakianakis, S.G., Potamias, G.A., Zacharioudakis, G., & Kafetzopoulos, D. (2007). A semantic grid infrastructure enabling integrated access and knowledge discovery from multilevel data in post-genomic clinical trials. Sheffield, U.K., July. Springer (978-1-84628-990-3).
  82. Martin, L., Bonsma, E., Anguita, A., Vrijnsen, J., Garcia-Remesal, M., Crespo, J., Tsiknakis, M.N., & Maojo, V. (2007). Data Access and Management in ACGT: Tools to Solve Syntactic and Semantic Heterogeneities Between Clinical and Image Databases. Advances in Conceptual Modeling - Foundations and Applications, Advances in Conceptual Modeling - Foundations and Applications, Auckland, New Zealand, November 5-9 (pp. 24-33).
  83. Chronaki, C., Kontogiannis, V., Mytaras, M., Aggourakis, N., Kostomanolakis, S.G., Roumeliotaki, T., Kavlentakis, G., Chiarugi, F., & Tsiknakis, M.N. (2007). Evaluation of Shared EHR Services in Primary Healthcare Centers and their Rural Community Offices: the Twister Story. Engineering in Medicine and Biology Society, 2007. EMBS 2007. 29th Annual International Conference of the IEEE, (pp. 6421-6424). (1557-170X).
  84. Ruping, S., Sfakianakis, S.G., & Tsiknakis, M.N. (2007). Extending workflow management for knowledge discovery in clinico-genomic data. In Proceedings of the HealthGrid 2007 Conference, Geneva, Switzerland, 24-27 April (vol. 126, pp. 184-193). Netherlands (0926-9630).
  85. Tsiknakis, M.N., Grangeat, P., Binz, P.A., Potamias, G.A., Lisacek, F., Gerfault, L., Paulus, C., Manakanatas, D., Kritsotakis, V., Kondylakis, H., Perez, M., Plexousakis, D., Kaforou, S., & Kafetzopoulos, D. (2007). Functional specifications of an integrated proteomics information management and analysis platform.Conf Proc IEEE Eng Med Biol Soc, (vol. 2007, pp. 6065-6069). (1557170X).
  86. Tsiknakis, M.N., Sfakianakis, S.G., Potamias, G.A., & Kafetzopoulos, D. (2007). Integration of heterogeneous, multilevel biomedical data: Semantic Grid services enabling integrated access, analysis and knowledge discovery in the context of multicentric, post-genomic clinical trials. In Proceedings of the 9th International Conference on Enterprise Information Systems, Funchal, Madeira – Portugal, 12-16 June.
  87. Potamias, G.A., Koumakis, L., Kanterakis, A., Sfakianakis, S.G., Analyti, A., Moustakis, V.A., Kafetzopoulos, D., Ruping, S., & Tsiknakis, M.N. (2007). Knowledge Discovery Scientific Workflows in Clinico-GenomicsIn Proceedings of the19th IEEE International Conference on Tools with Artificial Intelligence (ICTAI 07), Patras, Greece, 29-31 October (pp. 91-95). IEEE Computer Society.
  88. Martin, L., Anguita, A., De la Calle, G., Garcia-Remesal, M., Crespo, J., Tsiknakis, M.N., & Maojo, V. (2007). Semantic data integration in the European ACGT project.. In Proceedings of the American Medical Informatics Association (AMIA) Annual Symposium, Chicago, IL (USA), 11-14 November (pp. 1042). (15594076).
  89. Anguita, A., Martin, L., Crespo, J., Tsiknakis, M.N., & Maojo, V. (2007). Solving semantic heterogeneities and integration between clinical and image databases in post-genomic clinical trials. in Proceedings of the Personalised Healthcare (phealth2007) Conference (sponsored by the IEEE Engineering in Medicine and Biology Society (EMBS), Chalkidiki, Greece, June.
  90. Stamatakos, G.S., Dionysiou, D.D., Graf, N., Sofra, N.A., Desmedt, C., Hoppe, A., Uzunoglu, N.K., & Tsiknakis, M.N. (2007). The "Oncosimulator": a multilevel, clinically oriented simulation system of tumor growth and organism response to therapeutic schemes. Towards the clinical evaluation of in silico oncology. In Proceedings of the IEEE Engineering in Medicine and Biology Conference (EMBC 2007), Lyon, France, August (vol. 2007, pp. 6629-6632). (1557170X).
  91. Chiarugi, F., Zacharioudakis, G., Tsiknakis, M.N., Thestrup, J., Hansen, K.M., Antolin, P., Camara, M.J., Rosengren, P., & Meadows, J. (2006). Ambient Intelligence Support for Tomorrow's Health Care: Scenario Based Requirements and Architectural Specifications of the eu-DOMAIN Platform. In Proceedings of the IEEE Information Technology and Applications in Biomedicine, Ioannina, Greece, 26-28 October.
  92. Tsiknakis, M.N., Kafetzopoulos, D., Potamias, G.A., Analyti, A., Marias, K., & Manganas, A. (2006). Building a European biomedical grid on cancer: the ACGT Integrated Project.. Challenges and Opportunities of Healthgrids: Proceedings of the HealthGrid 2006 Conference, Valencia, Spain, (vol. 120, pp. 247-258). IOS Press (09269630).
  93. Tsiknakis, M.N., Kafetzopoulos, D., Potamias, G.A., Analyti, A., Marias, K., & Sfakianakis, S.G. (2006). Developing a European Biomedical GRID for post-genomic research on Cancer. Proceedings of the IEEE International Topic Conference on Information Technology in Biomedicine (ITAB-2006), Ioannina, Greece, 25-28 October.
  94. Sfakianakis, S.G., Chronaki, C., Bernstein, I., Norgaard, J.R., Katehakis, D.G., Potamias, G.A., & Tsiknakis, M.N. (2006). Early experience from HL7 v3 tools, the Pedigree topic, and CDA in the Danish HNPCC Registry. International HL7 Interoperability Conference IHIC, Cologne, Germany, 24-25 August.
  95. Kouroubali, A., Sakkalis, V., Chronaki, C., & Tsiknakis, M.N. (2006). eChallenges in the Implementation of eHealth Services over a Hybrid Network Architecture. eChallenges 06 Conference, Barcelona, Spain, 25-27 October.
  96. Chiarugi, F., Tsiknakis, M.N., Conforti, D., Lagani, V., Perticone, F., Parati, G., Kawecka-Jaszcz, K., Marsh, A., Stratakis, M., Di Bona, S., Fontanelli, R., Guerri, D., Salvetti, O., Gamberger, D., & Valentini, M. (2006). Support for the Medical-Clinical Management of Heart Failure within Elderly Population: the HEARTFAID Platform. In Proceedings of the IEEE Information Technology and Applications in Biomedicine, Ioannina, Greece, 26-28 October.
  97. Marias, K., Linguraru, M.G., Ballester, M.A.G., Petroudi, S., Tsiknakis, M.N., & Brady, M.J. (2005). Automatic Labelling and BI-RADS Characterisation of Mammogram Densities. Engineering in Medicine and Biology Society, 2005. IEEE-EMBS 2005. In Proceedings of 27th IEEE Engineering in Medicine and Biology Society (EMBS) Annual International Conference, Shanghai, China(pp. 6394-6398).
  98. Potamias, G.A., Analyti, A., Kafetzopoulos, D., Kafousi, M., Margaritis, Th., Plexousakis, D., Poirazi, P., Reczko, M., Tollis, I.G., Sanidas, E., Stathopoulos, E., Tsiknakis, M.N., & Vassilaros, S. (2005). Breast Cancer and Biomedical Informatics: The PrognoChip Project. Proceedings of the 17th IMACS World Congress Scientific Computation, Applied Mathematics and Simulation, Paris, France, July. Paris, France (2-915913-02-1).
  99. Tsiknakis, M.N., Kouroubali, A., Vourvahakis, D., & Orphanoudakis, S.C. (2005). Implementing a Regional Health Information Network: Impact on Health Care Performance and the Management of Change. (vol. 5, pp. 297-329). (14748231; 0762312289 (ISBN); 9780762312283 (ISBN)).
  100. Kouroubali, A., Vourvahakis, D., & Tsiknakis, M.N. (2005). Innovative Practices in the Emergency Medical Services in Crete. iSHMIR 05, Thessaloniki, Greece, September.
  101. Stathiakis, N., Katehakis, D.G., Chronaki, C., & Tsiknakis, M.N. (2005). Security Risk Management in Electronic Health Record Systems. 21st Annual Conference & Exhibition Towards an Electronic Patient Record (TEPR), Salt Lake City, USA, 16-18 May.
  102. Tsiknakis, M.N., Katehakis, D.G., & Orphanoudakis, S.C. (2004). A health information infrastructure enabling secure access to the life-long multimedia electronic health record. CARS, Chicago, USA, June 23-26 (pp. 289-294).
  103. Tsiknakis, M.N., Potamias, G.A., & Kafetzopoulos, D. (2004). An Integrated Clinico-genomic computational Environment: Design and operational specifications. In Proc. of the 2nd International Conference on Information Communication Technologies in Health, "Health Informatics & Health Telematics: Foundations for High Quality of Care", Samos, Greece, July 8-10.
  104. Chronaki, C., Lelis, P., Chiarugi, F., Trypakis, D., Moumouris, K., Stavrakis, H., Kavlentakis, G., Stathiakis, N., Tsiknakis, M.N., & Orphanoudakis, S.C. (2004). An open eHealth platform for health management using adaptable service profiles. CARS, Chicago, USA, June 23-26 (pp. 295-300).
  105. Potamias, G.A., Analyti, A., Kafetzopoulos, D., Tsiknakis, M.N., Plexousakis, D., Poirazi, P., Reczko, M., Tollis, I.G., Sanidas, E., Stathopoulos, E., & Vassilaros, S. (2004). Breast Cancer, Microarrays and Biomedical Informatics: The Prognochip Project. First International Advanced Research Workshop In Silico Oncology: Advances and Challenges (1st IARWISO), Sparta, Greece, 9-11 September.
  106. Tzelepis., Th.Z., Tsiknakis, M.N., Katehakis, D.G., & Orphanoudakis, S.C. (2004). Design and Implementation of 'Two-level' Clinical Information Systems, based on Archetypes. 2nd International Conference on Information Communication Technologies in Health (ICICTH 2004), Samos Island, Greece, July 8-10, 2004.
  107. Chronaki, C., Chiarugi, F., Trypakis, D., Tsiknakis, M.N., & Orphanoudakis, S.C. (2004). Interoperability of ECG Devices and the Electronic Health Record: Challenges and Opportunities. MEDICON 2004 Conference, Ischia, Italy, August.
  108. Lelis, P., Chronaki, C., Tsiknakis, M.N., & Orphanoudakis, S.C. (2004). Promoting the Engineering of adaptable eHealth services. In Proc. of the 2nd International Conference on Information Communication Technologies in Health, "Health Informatics & Health Telematics: Foundations for High Quality of Care", Samos, Greece, July 8-10.
  109. Sakkalis, V., Chiarugi, F., Kostomanolakis, S.G., Chronaki, C., Tsiknakis, M.N., & Orphanoudakis, S.C. (2003). A gateway between the SCP-ECG and the DICOM supplement 30 waveform standard. Computers in Cardiology 2003, Thessaloniki Chalkidiki, 21 September 2003 through 24 September 2003 (vol. 30, pp. 25-28). (02766574).
  110. Chronaki, C., Chiarugi, F., Mavrogiannaki, E., Demou, C., Lelis, P., Trypakis, D., Spanakis, E.G., Tsiknakis, M.N., & Orphanoudakis, S.C. (2003). An eHealth platform for instant interaction among health professionals. Computers in Cardiology 2003, Thessaloniki Chalkidiki, 21 September 2003 through 24 September 2003 (vol. 30, pp. 101-104). (02766574).
  111. Chiarugi, F., Trypakis, D., Kontogiannis, V., Lees, P.J., Chronaki, C., Zeaki, M., Giannakoudakis, N., Vourvahakis, D., Tsiknakis, M.N., & Orphanoudakis, S.C. (2003). Continuous ECG monitoring in the management of pre-hospital health emergencies. Computers in Cardiology 2003, Thessaloniki Chalkidiki, 21 September 2003 through 24 September 2003 (vol. 30, pp. 205-208). (02766574).
  112. Chiarugi, F., Spanakis, E.G., Lees, P.J., Chronaki, C., Tsiknakis, M.N., & Orphanoudakis, S.C. (2003). ECG in your hands: A multi-vendor ECG viewer for personal digital assistants. Computers in Cardiology 2003, Thessaloniki Chalkidiki, 21 September 2003 through 24 September 2003 (vol. 30, pp. 359-362). (02766574).
  113. Stathiakis, N., Chronaki, C., Skipenes, E., Henriksen, E., Charalambous, E., Sykianakis, A., Vrouchos, G., Antonakis, N., Tsiknakis, M.N., & Orphanoudakis, S.C. (2003). Risk assessment of a cardiology eHealth service in HYGEIAnet. Computers in Cardiology 2003, Thessaloniki Chalkidiki, 21 September 2003 through 24 September 2003 (vol. 30, pp. 201-204). (02766574).
  114. Potamias, G.A., Koumakis, L., Charissis, G., Moustakis, V.A., Tsiknakis, M.N., & Orphanoudakis, S.C. (2003). Supporting Population Centered Medical Decision Making: Design Recommendations and Preliminary Assessment. Proceedings of the Tenth International Conference on Human-Computer Interaction; Universal access in HCI : inclusive design in the information society, (vol. 4, pp. 795-799).
  115. Tsiknakis, M.N., Lelis, P., & Chronaki, C. (2002). HL7 CDA in HYGEIAnet. The Regional Health Information Network of Crete, HL7 International CDA Conference.
  116. Katehakis, D.G., Kostomanolakis, S.G., Tsiknakis, M.N., & Orphanoudakis, S.C. (2002). Image Management in an Integrated Electronic Health Record Environment. In Proceedings of EuroPACS 2002, 20th International Conference, Oulou, Finland, 5-7 september (pp. 87-92).
  117. Chiarugi, F., Spanakis, E.G., Lees, P.J., Chronaki, C., Tsiknakis, M.N., Traganitis, A.P., & Orphanoudakis, S.C. (2002). Real-time cardiac monitoring over a regional health network: Preliminary results from initial field testing. Computers in Cardiology 2002, Memphis, TN, 22 September 2002 through 25 September 2002 (vol. 29, pp. 347-350). (02766574).
  118. Chiarugi, F., Spanakis, E.G., Lees, P.J., Tsiknakis, M.N., Traganitis, A.P., & Orphanoudakis, S.C. (2002). Remote Multiparametric Monitoring in a Regional Health Network. 2nd European Medical & Biological Engineering Conference (EMBEC '02), Vienna, Austria.
  119. Chronaki, C., Lees, P.J., Chiarugi, F., Leisch, E., Tsiknakis, M.N., & Orphanoudakis, S.C. (2002). Towards an Integrated Cardiology Information System. Proceedings of TEPR 2002, Toward an Electronic Patient Record Conference, Seattle, Washington, USA, May.
  120. Katehakis, D.G., Tsiknakis, M.N., & Orphanoudakis, S.C. (2001). An architecture for integrated regional health telematics networks. 23rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, Istanbul, 25 October 2001 through 28 October 2001 (vol. 4, pp. 3642-3645). (04549244).
  121. Chronaki, C., Lelis, P., Demou, C., Tsiknakis, M.N., & Orphanoudakis, S.C. (2001). An HL7/CDA framework for the design and deployment of telemedicine services. 23rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, Istanbul, 25 October 2001 through 28 October 2001 (vol. 4, pp. 3504-3507). (04549244).
  122. Chiarugi, F., Lees, P.J., Chronaki, C., Tsiknakis, M.N., & Orphanoudakis, S.C. (2001). Developing manufacturer-independent components for ECG viewing and for data exchange with ECG devices: Can the SCP-ECG standard help?. Computer in Cardiology 2001, Rotterdam, 23 September 2001 through 26 September 2001 (pp. 185-188). (02766574).
  123. Katehakis, D.G., Tsiknakis, M.N., & Orphanoudakis, S.C. (2001). Enabling Components of HYGEIAnet. 17th Annual Towards an Electronic Patient Record Conference and Exhibition (TEPR 2001). 8-13 May, Boston, MA, 8-13 May (pp. 146-153).
  124. Katehakis, D.G., Sfakianakis, S.G., Tsiknakis, M.N., & Orphanoudakis, S.C. (2001). Fundamental components for the realization of a federated integrated electronic health record environment. 23rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, Istanbul, 25 October 2001 through 28 October 2001 (vol. 4, pp. 3646-3649). (04549244).
  125. Traganitis, A.P., Trypakis, D., Spanakis, E.G., Condos, S., Stamkopoulos, T., Tsiknakis, M.N., & Orphanoudakis, S.C. (2001). Home monitoring and personal health management services in a regional health telematics network. 23rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, Istanbul, 25 October 2001 through 28 October 2001 (vol. 4, pp. 3575-3578). (04549244).
  126. Chiarugi, F., Lombardi, D., Lees, P.J., Chronaki, C., Tsiknakis, M.N., & Orphanoudakis, S.C. (2001). Integration of an ECG management system with an existing clinical database to support daily ECG procedures in a cardiology department.  The European Society of Cardiology - XXIII Congress 2001, Stockholm, Sweden, September 2001..
  127. Chronaki, C., Lees, P.J., Antonakis, N., Chiarugi, F., Vrouchos, G., Nikolaidis, G., Tsiknakis, M.N., & Orphanoudakis, S.C. (2001). Preliminary results from the deployment of integrated teleconsultation services in rural crete. Computer in Cardiology 2001, Rotterdam, 23 September 2001 through 26 September 2001 (pp. 671-674). (02766574).
  128. Lees, P.J., Chiarugi, F., Lombardi, D., Chronaki, C., Tsiknakis, M.N., & Orphanoudakis, S.C. (2001). Simulator of patient traffic in a cardiology department for testing the integration of an ECG management system with an existing clinical database. Computer in Cardiology 2001, Rotterdam, 23 September 2001 through 26 September 2001 (pp. 197-200). (02766574).
  129. Tsiknakis, M.N., Chronaki, C., Kostomanolakis, S.G., & Orphanoudakis, S.C. (2001). Teleradiology services within the context of an integrated regional network. CARS, Berlin, Germany, June 27-30 (pp. 1267-1268).
  130. Chiarugi, F., Lees, P.J., Lombardi, D., Chronaki, C., Tsiknakis, M.N., & Orphanoudakis, S.C. (2001). Ενσωμάτωση Εμπορικού Συστήματος Διαχείρισης Ψηφιακών ΗΚΓ σε Προϋπάρχουσα Βάση Κλινικών Δεδομένων για την Υποστήριξη Καθημερινής Διαδικασίας σε Καρδιολογική Κλινική Νοσοκομείου. παρουσιάστηκε στο Συνέδριο της Ελληνικής Καρδιολογικής Εταιρείας το 2001.
  131. Katehakis, D.G., Lelis, P., Karabela, E., Tsiknakis, M.N., & Orphanoudakis, S.C. (2000). An Environment for the Creation of an Integrated Electronic Health Record in HYGEIAnet. Proceedings of the 16th Annual Towards an Electronic Patient Record Conference and Exhibition (TEPR 2000), San Francisco, California, USA, May 9-11 (vol. 10, pp. 89-98).
  132. Kostomanolakis, S.G., Chronaki, C., Tsiknakis, M.N., & Orphanoudakis, S.C. (2000). DicomGW: DICOM functionality as middleware. ECR 2000, Scientific Exhibit Compurad/EURORAD.
  133. Katehakis, D.G., Kostomanolakis, S.G., Tsiknakis, M.N., & Orphanoudakis, S.C. (2000). Evaluating Alternative Approaches for Integrating Clinical Information Systems: Messaging vs. Federating. TEHRE 2000, Your Eye on the Future: What EHR and e-Health will provide, London, UK, November, 12-15, 2000.
  134. Tsiknakis, M.N., Katehakis, D.G., & Orphanoudakis, S.C. (2000). Information infrastructure for an integrated healthcare services network. ITAB-ITIS 2000, Arlington, VA, 9 November 2000 through 10 November 2000 (pp. 278-283).
  135. Katehakis, D.G., Tsiknakis, M.N., & Orphanoudakis, S.C. (2000). Information Society Technologies in Healthcare. SOFSEM, Milovy, Czech Republic, November 25 - December 2 (pp. 152-172).
  136. Chronaki, C., Kostomanolakis, S.G., Lelis, P., Lees, P.J., Chiarugi, F., Tsiknakis, M.N., & Orphanoudakis, S.C. (2000). Integrated teleconsultation services in cardiology. Computers in Cardiology 2000, Cambridge, MA, USA, (pp. 175-178). Los Alamitos, CA, United States: IEEE (02766574).
  137. Lees, P.J., Chronaki, C., Chiarugi, F., Tsiknakis, M.N., & Orphanoudakis, S.C. (2000). Interconnectivity of cardiology patient databases using internet technology. Computers in Cardiology 2000, Cambridge, MA, USA, (pp. 667-670). Los Alamitos, CA, United States: IEEE (02766574).
  138. Hristofis, K., Potamias, G.A., Tsiknakis, M.N., Moustakis, V.A., & Orphanoudakis, S.C. (2000). Mining Distributed and Heterogeneous Data Sources: A Project in the Medical Domain. Parcelona, Spain.
  139. Sarrannumi, N., Tsiknakis, M.N., & Bernstein, K. (2000). Professionals and Citizens Network for Integrated Care. In Proceedings of the EMBC 2000, 22nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, Chicago, USA, June.
  140. Kostomanolakis, S.G., Kavlentakis, G., Sakkalis, V., Chronaki, C., Tsiknakis, M.N., & Orphanoudakis, S.C. (2000). Seamless Integration of Healthcare Processes related to Image Management and Communication in Primary Healthcare Centers. EuroPACS, Graz, 21-23 September (pp. 126-132).
  141. Potamias, G.A., Christofis, C., Tsiknakis, M.N., & Orphanoudakis, S.C. (2000). Towards internet-based epidemiology: integration of distributed and heterogeneous clinical data sources. In Word Congress on the Internet on Medicine - MEDNET2000, Brussels, belgium, (vol. 8, pp. 211-212). Amsterdam, The Netherlands: IOS Press (0928-7329).
  142. Chronaki, C., Lelis, P., Tsiknakis, M.N., & Orphanoudakis, S.C. (2000). XML Technology in Support of Clinical Protocols for Teleconsultation. World congress on the Internet in medicine; Abstracts of MEDNET 2000, Brussels, 2000 Nov (vol. 8, pp. 207-208). IOS Press.
  143. Tsiknakis, M.N., & Katehakis, D.G. (1999). Virtual EHCR Services over HYGEIAnet: The Patient Clinical Data Directory. In Proceedings of Towards an Electronic Health Record Europe (TEHRE '99), London, U.K., November 15.
  144. Chronaki, C., Katehakis, D.G., Tsiknakis, M.N., & Orphanoudakis, S.C. (1998). WebOnCOLL: An Open Platform Enabling Collaborative Information Sharing and its Application in Medicine. Nicosia, Cyprus, March 4-7.
  145. Chronaki, C., Zabulis, X., Stathiakis, N., Leisch, E., Katehakis, D.G., Tsiknakis, M.N., & Orphanoudakis, S.C. (1997). A Web-Based Environment for Medical Collaboration in a Regional Health Care Network. In Proceedings of the CAR '97, Berlin, Germany(pp. 656-661).
  146. Katehakis, D.G., Tsiknakis, M.N., Armaganidis, A., & Orphanoudakis, S.C. (1997). Functional and Control Integration of an ICU, LIS and PACS Information System. In Proceedings of the 14th Medical Informatics Europe Congress (MIE 97), Porto Carras, Greece, May 25-29 (pp. 15-19). IOS Press.
  147. Leisch, E., Tsiknakis, M.N., & Orphanoudakis, S.C. (1996). An architectural framework for the integration of geographically distributed heterogeneous autonomous medical information systems. In Proceedings of EuroPACS '96, Crete, Greece, October 3-5 (pp. 73-77).
  148. Orphanoudakis, S.C., Tsiknakis, M.N., & Chronaki, C. (1996). Virtual Workspaces. in Proceedings of the MEDNET 96 conference, Brighton, UK, October 14-17 (pp. 89-91).
  149. Orphanoudakis, S.C., Tsiknakis, M.N., Chronaki, C., & Kostomanolakis, S.G. (1995). Development of an Integrated Image Management and Communication System on Crete. Computer assisted radiology, Berlin, 1995 Jun (pp. 481-487). Springer-Verlag (354059177X).
  150. Tsiknakis, M.N., Chronaki, C., Kostomanolakis, S.G., & Orphanoudakis, S.C. (1995). The Regional Health Telematic System of Crete. Health telematics '95: health in the information society, Naples; Italy, 1995 Jul (pp. 553-558). The Association (8879580035).
    Papers in Proceedings (abstract reviewed)

  1. Kouroubali, A., Katehakis, D.G., Berler, A., & Tsiknakis, M.N. (2012). Electronic Health Record: Luxury or Need? (Ηλεκτρονικός Φάκελος Υγείας: Πολυτέλεια ή Ανάγκη;). 14th National Conference of the Hellenic Health Services Management Association, Innovation in Hospital Management, Athens, Greece, October 12-13 (pp. 18).
  2. Graf, N., Tsiknakis, M.N., Góralczyk, M., McGuiness, N., Verhenneman, G., Claerhout, B., Braun, Y., & Forgó, N. (2011). Legal, ethical and clinical handling of consent in European projects dealing with vulnerable patient groups. 43rd Congress of the International Society of Paediatric Oncology (SIOP), Auckland, Australia, Oct 2011..
  3. Graf, N., Sengstag, T., Schera, F., Martin, L., Claerhout, B., Stenzhorn, H., Nourkami, N., Gessler, M., & Tsiknakis, M.N. (2010). Advanced Wilms Tumour Scenario using the ACGT environment. 7th International Meeting on the Biology of Childhood renal tumours, Canada.
  4. Chronaki, C., Kouroubali, A., Stathopoulou, A., Roumeliotaki, T., Orphanoudaki, E., Esterle, L., & Tsiknakis, M.N. (2006). Χρήση Διαδικτύου για Θέματα Υγείας στην Ελλάδα: Ηλεκτρονικές Υπηρεσίες Υγείας και Προοπτικές. 13ο Παγκρήτιο Ιατρικό Συνέδριο.
  5. Orphanoudakis, S.C., Tsiknakis, M.N., Anthoulakis, D., & Stephanidis, C. (2003). The integrated Electronic Health Record: accessibility, usability and security issues. In C. Stephanidis, (Ed.), Universal Access in HCI: Inclusive Design in the Information Society - Volume 4 of the Proceedings of the 10th International Conference on Human-Computer Interaction (HCI International 2003), Crete, Greece, 22-27 June (pp. 1168-1172). Mahwah, New Jersey: Lawrence Erlbaum Associates (ISBN 0-8058-4933-5).
  6. Tsiknakis, M.N., Katehakis, D.G., & Orphanoudakis, S.C. (2002). Architecture for the Development of Integrated Health Telematics Services Networks (in Greek). 6th FORTH Workshop, Ioannina and Metsovo, Greece, March 1-3, 2002, (pp. 68-69).
  7. Katehakis, D.G., Sfakianakis, S.G., Tsiknakis, M.N., & Orphanoudakis, S.C. (2002). Integrated Electronic Health Record (in Greek). Proceedings of the 6th FORTH Workshop, Ioannina and Metsovo, Greece, March 1-3, 2002, (pp. 70-71).
    Poster presentations (abstract reviewed)

  1. Roniotis, A., Kondylakis, H., & Tsiknakis, M.N. (2017). Detection and Management of Depression in Cancer Patients using Augmented Reality Technologies, Multimodal Signal Processing and Persuasive Interfaces. 30th IEEE International Symposium on Computer-Based Medical Systems - IEEE CBMS, Thessaloniki, Greece, 22-24 June 2017.
  2. Spanakis, M., Spanakis, E.G., Kafetzopoulos, D., Sakkalis, V., Tsiknakis, M.N., Marias, K., & Dong, F. (2015). MyHealthAvatar platform: matching real life patients with the generated virtual profiles from in silico clinical trials24th Annual Meeting of the Population Approach Group in Europe (PAGE), At Hersonissos, Crete, Greece, Volume: ISSN 1871-6032.
  3. Kazantzaki, E., Chatzimina, M., Koumakis, L., Roussos, P, Potamias, G.A., Marias, K., Tsiknakis, M.N., & Bitsios, P (2015). Διαδικτυακή εφαρμογή για την συλλογή φαινοτύπων για πρώιμη διάγνωση ψυχικών διαταραχών. 4th East European Psychiatric Congress & 3rd Preventive Psychiatry International Congress. Athens Greece 12-15 Nov. 2015.
  4. Vorgia, P., Voutoufianakis, S., Champsas, D., Kritsotakis, M., Pediaditis, M., Giannakakis, G., Dimitriou, E., Mantzourani, E., & Tsiknakis, M.N. (2014). Presentation study for the development of non invasive epileptic seizure prediction device and electronic health medical record of epileptic patients. In Proceedings of the 9th Panhellenic Congress of Epilepsy, Athens, Greece, 17-19 October 2014.
  5. Pediaditis, M., Tsiknakis, M.N., Voutoufianakis, S., & Vorgia, P. (2012). Αυτόματη ανάλυση βίντεο κλινικής εικόνας σε κρίσεις αφαίρεσης. 7ο Πανελλήνιο Συνέδριο Επιληψίας.
  6. Grangeat, P., Gerfault, L., Paulus, C., Kritsotakis, V., Tsiknakis, M.N., Lisacek, F., Binz, P.A., Perez, M., Trauchessec, M., & Brun, V. (2010). First demonstration on NSE biomarker of a computational environment dedicated to lab-on-chip based cancer diagnosis. 58th ASMS Conference on Mass Spectrometry and Allied Topics, Salt Lake City, Utah, May 23 - 27.
  7. Graf, N., Desmedt, C., Hoppe, A., Tsiknakis, M.N., Dionysiou, D.D., & Stamatakos, G.S. (2007). Clinical requirements of "In Silico Oncology" as part of the integrated project ACGT (Advancing Clinico-Genomic Trials on Cancer). ECCO 14 Abstract Book, Barcelona, Spain, 23-27 September (vol. 5, pp. 83-83). (1359-6349).
  8. Graf, N., Weiler, G., Brochhausen, M., Scherer, F., Hoppe, A., Tsiknakis, M.N., & Kiefer, S. (2007). The importance of anontology based clinical data management system (OCDMS) for clinico-genomic trials in ACGT. In Proceedings of the International Society of Paediatric Oncology Conference 2007, Mumbai, India, 1-3 November.
  9. Potamias, G.A., Tsiknakis, M.N., Papoutsidis, V., Kanterakis, A., Marias, K., & Kafetzopoulos, D. (2006). Advancing Clinico-Genomic Research Trials via Integrated Knowledge Discovery Operations. Informatics in Europe (MIE 2006), Maastricht, the Netherlands, August 27-30.

            WorkShops (3)

              Papers in Proceedings (full-paper reviewed)

            1. Pampouchidou, A., Simantiraki, O., Fazlollahi, A., Pediaditis, M., Manousos, D., Roniotis, A., Giannakakis, G., Meriaudeau, F., Simos, P.G., Marias, K., Yang, Q., & Tsiknakis, M.N. (2016). Depression Assessment by Fusing High and Low Level Features from Audio, Video, and Text . The 6th Audio/Visual Emotion Challenge and Workshop, ACM-Multimedia , Amsterdam, The Netherlands, October 16th, 2016 (pp. 27-34). ACM Press (http://doi.acm.org/10.1145/2988257.2988266).
            2. Pediaditis, M., Tsiknakis, M.N., Bologna, V., & Vorgia, P. (2011). Model-Free Vision-Based Facial Motion Analysis in Epilepsy. 10th International Workshop on Biomedical Engineering (BioEng 2011). Kos, Greece .
                  Posters

                1. Spanakis, E.G., Sakkalis, V., Marias, K., Dong, F., & Tsiknakis, M.N. (2014). MyHealthAvatar: The digital patient perspective1st International Summer School on eCare - Integrated, sustainable home care, organized August 25 - 29, 2014 in Ghent, Belgium,  ("Best Poster Award").

                        Books (12)

                            Editor

                          1. Saranummi, N., Piggott, D., Katehakis, D.G., Tsiknakis, M.N., & Bernstein, K. (2005). Regional Health Economies and ICT Services: The PICNIC Experience.  (pp. i-xi), Vol. 115 IOS Press, (ISBN 978-1-58603-538-9).
                            Chapters (in book)

                          1. Koumakis, L., Potamias, G.A., Tsiknakis, M.N., Zervakis, M.E., & Moustakis, V.A. (2015). Integrating Microarray Data and GRNs. Pietro Hiram Guzzi. Microarray Data Analysis, second edition. Methods in Molecular Biology (2014). Springer Protocols. .
                          2. Giannakakis, G., Sakkalis, V., Pediaditis, M., & Tsiknakis, M.N. (2015). Methods for Seizure Detection and Prediction: An Overview. NeuromethodsVol. 91 (pp. 131 - 157), Springer New York.
                          3. Spanakis, E.G., Sakkalis, V., Marias, K., & Tsiknakis, M.N. (2014). Connection between Biomedical Telemetry and Telemedicine. Handbook of Biomedical Telemetry . 2014/7/17 (pp. 419 - 444).
                          4. Kondylakis, H., Koumakis, L., Tsiknakis, M.N., Marias, K., Genitsaridi , I., Pravettoni, G, Gorini, A., & Mazzocco, K. (2013). Smart recommendation services in support of patient empowerment and personalized medicine. Multimedia Services in Intelligent Environments – Recommendation Services.  Springer-Verlag.
                          5. Hristoskova, A., Sakkalis, V., Zacharioudakis, G., Tsiknakis, M.N., & De Turck, F. (2011). Ontology-Driven Monitoring of Patient’s Vital Signs Enabling Personalized Medical Detection and Alert. Lecture Notes of the Institute for Computer Sciences, Social Informatics and Telecommunications Engineering (LNICST)Vol. 83 (pp. 217 - 224), Springer 2012, (ISBN 978-3-642-29733-5).
                          6. Dimou, I.N., Zervakis, M.E., Lowe, D., & Tsiknakis, M.N. (2009). Computational Methods and Tools for Decision Support in Biomedicine: An Overview of Algorithmic Challenges. Handbook of Research on Advanced Techniques in Diagnostic Imaging and Biomedical Applications.  (1) (pp. 1 - 17), IGI Global (formerly Idea Group Inc.), (ISBN ISBN13: 9781605663142, ISBN10: 160566314X).
                          7. Kouroubali, A., Sakkalis, V., Chronaki, C., & Tsiknakis, M.N. (2006). eChallenges in the Implementation of eHealth Services Over a Hybrid Network Architecture: the case of eLearning. Exploiting the Knowledge Economy: Issues, Applications, Case Studies.  IOS Press, (ISBN 1-58603-682-3).
                          8. Katehakis, D.G., & Tsiknakis, M.N. (2006). Electronic Health Record (EHR).  John Wiley & Sons, Inc., (ISBN 0-471-24967-X, May 2006).
                          9. Tsiknakis, M.N. (2006). The HYGEIAnet experiences on adoption of innovations and change management. Network For Future Regional Health Care, Transforming Health Care Organisations.  (pp. 31 - 46), Helsinki University Press, (ISBN 952-10-3494-7).
                          10. Tsiknakis, M.N., & Saranummi, N. (2005). Lessons Learned from PICNIC. Regional Health Economies and ICT Services: The PICNIC ExperienceVol. 115 (pp. 215 - 228), Netherlands, (ISBN 0926-9630).
                          11. Kouroubali, A., Detmer, D.E., Tsiknakis, M.N., & Orphanoudakis, S.C. (2004). A Health Care Information System in Greece: Key Factors, Self-Organization, and Take-Home Lessons.  (ISBN 978-0-7879-7105-2).

                                Periodicals (78)

                                  Journal Articles

                                1. Pampouchidou, A., Simos, P.G., Marias, K., Meriaudeau, F., Yang, F., Pediaditis, M., & Tsiknakis, M.N. (2017). Automatic Assessment of Depression Based on Visual Cues: A Systematic Review . IEEE Transactions on Affective Computing, IEEE (http://ieeexplore.ieee.org/document/8052569/), doi: 10.1109/TAFFC.2017.2724035.
                                2. Kondylakis, H., Koumakis, L., Hanold, S., Nwankwo, I., Forgó, N., Marias, K., Tsiknakis, M.N., & Graf, N. (2017). Donor’s Support Tool: Enabling Informed Secondary Use of Patient’s Biomaterial and Personal Data. International Journal of Medical Informatics, 282-292, Elsevier doi: 10.1016/j.ijmedinf.2016.10.019 .
                                3. Henriquez, P., Matuszewski, B., Andreu, Y., Bastiani, L., Colantonio, S., Coppini, G., Acunto, M., Favilla, R., Germanese, D., Giorgi, D., Marraccini, P., Martinelli, M., Morales, M.A., Pascali, M.A., Righi, M., Salvetti, O., Larsson, M., Stromberg, T., Randeberg, L., Bjorgan, A., Giannakakis, G., Pediaditis, M., Chiarugi, F., Christinaki, E., Marias, K., & Tsiknakis, M.N. (2017). Mirror mirror on the wall... an unobtrusive intelligent multisensory mirror for well-being status self-assessment and visualization. IEEE Transaction on Multimedia19(7), 1467-1481, doi: https://doi.org/10.1109/tmm.2017.2666545.
                                4. Pampouchidou, A., Pediaditis, M., Maridaki, A., Awais, M., Vazakopoulou, C.-M., Sfakianakis, S.G., Tsiknakis, M.N., Simos, P.G., Marias, K., Yang, F., & Meriaudeau, F. (2017). Quantitative comparison of motion history image variants for video-based depression assessment. EURASIP Journal on Image and Video Processing, 64, Springer Open (https://jivp-eurasipjournals.springeropen.com/articles/10.1186/s13640-017-0212-3), Special Issue on “Applications of Visual Analysis of Human Behaviour” doi: https://doi.org/10.1186/s13640-017-0212-3.
                                5. Spanakis, C., Mathioudakis, E., Kampanis, N.A., Tsiknakis, M.N., & Marias, K. (2016). A Proposed Method for Improving Rigid Registration Robustness. International Journal of Computer Science and Information Security14, 1-11, (19475500).
                                6. Kondylakis, H., Koumakis, L., Tsiknakis, M.N., Marias, K., & Kiefer, S. (2016). Big Data in Support of the Digital Cancer Patient. ERCIM News, 27-28.
                                7. Koumakis, L., Kanterakis, A., Kartsaki, E., Chatzimina, M., Zervakis, M.E., Tsiknakis, M.N., Vassou, D., Kafetzopoulos, D., Marias, K., Moustakis, V.A., & Potamias, G.A. (2016). MinePath: mining for phenotype differential sub-paths in molecular pathways. PLoS computational biologye1005187, Public Library of Science doi: https://doi.org/10.1371/journal.pcbi.1005187 .
                                8. Giannakakis, G., Pediaditis, M., Manousos, D., Kazantzaki, E., Chiarugi, F., Simos, P.G., Marias, K., & Tsiknakis, M.N. (2016). Stress and anxiety detection using facial cues from videos. Biomedical Signal Processing and Control31, 89-101, ELSEVIER doi: http://dx.doi.org/10.1016/j.bspc.2016.06.020.
                                9. Spanakis, E.G., Santana, S., Tsiknakis, M.N., Marias, K., Sakkalis, V., Teixeira, A., Janssen, J.H., de Jong, H., & Tziraki, C. (2016). Technology-Based Innovations to Foster Personalized Healthy Lifestyles and Well-Being: A Targeted Review. J Med Internet Res 18(6),  e128, DOI: 10.2196/jmir.4863, PMID: 27342137, http://www.jmir.org/2016/6/e128/.
                                10. Renzi, C., Fioretti, C., Mazzocco, K., Manfrinati, A., Kondylakis, H., Kazantzaki, E., Koumakis, L., Marias, K., Tsiknakis, M.N., & Pravettoni, G (2016). The development of a psycho‐emotional and family resilience assessment within an eHealth platform. Psycho-Oncology 25(3), 195.
                                11. Kondylakis, H., Claerhout, B., Keyur, M., Koumakis, L., Marias, K., Perez-Rey, D., Schepper, K. de, Tsiknakis, M.N., & Bucur, A. (2016). The INTEGRATE Project: Delivering solutions for efficient multi-centric clinical research and trials. Journal of Biomedical Informatics.
                                12. Andreu, Y., Chiarugi, F., Colantonio, S., Giannakakis, G., Giorgi, D., Henriquez, P., Kazantzaki, E., Manousos, D., Marias, K., Matuszewski, B., Pascali, M.A., Pediaditis, M., Raccichini, G., & Tsiknakis, M.N. (2016). Wize mirror - a smart, multisensory cardio-metabolic risk monitoring system. Computer Vision and Image Understanding148, 3-22.
                                13. Koumakis, L., Kamana, S, Potamias, G.A., Sfakianakis, S.G., van Leeuwen, J, Zacharioudakis, G., Moustakis, V.A., Zervakis, M.E., Bucur, A., Marias, K., Graf, N., & Tsiknakis, M.N. (2015). Bridging miRNAs and pathway analysis in clinical decision support; a case study in nephroblastoma. Network Modeling Analysis in Health Informatics and Bioinformatics4(1).
                                14. Koumakis, L., Sigdel, K., Potamias, G.A., Sfakianakis, S.G., van Leeuwen, J, Zacharioudakis, G., Moustakis, V.A., Zervakis, M.E., Bucur, A., Marias, K., Graf, N., & Tsiknakis, M.N. (2015). Bridging miRNAs and pathway analysis in clinical decision support: a case study in nephroblastoma. Network modeling analysis in health informatics and bioinformatics, 1-12, Springer doi: 10.1007/s13721-015-0102-5.
                                15. Genitsaridi , I., Kondylakis, H., Koumakis, L., Marias, K., & Tsiknakis, M.N. (2015). Evaluation of Personal Health Record Systems through the Lenses of EC Research Projects. Computers in Biology and Medicine Journal59, 175-185.
                                16. Sfakianaki, P., Koumakis, L., Sfakianakis, S.G., Iatraki, G., Zacharioudakis, G., Graf, N., Marias, K., & Tsiknakis, M.N. (2015). Semantic biomedical resource discovery: a Natural Language Processing framework. BMC Medical Informatics and Decision Making 15(77).
                                17. Hochedlinger, N, Nitzlnader, M, Falgenhauer, M, Welte, S, Hayn, D, Koumakis, L., Potamias, G.A., Tsiknakis, M.N., Saraceno, D., Rinaldi, E., Ladenstein, R., & Schreier, G. (2015). Standardized Data Sharing in a Paediatric Oncology Research Network-A Proof-of-Concept Study. Stud Health Technol Inform, 27-34, doi: 10.3233/978-1-61499-524-1-27.
                                18. Kondylakis, H., Kazantzaki, E., Koumakis, L., Genitsaridi , I., Marias, K., Gorini, A., Mazzocco, K., & Pravettoni, G, Burke, D, McVie, G, Tsiknakis, M.N. (2014). Development of Interactive Empowerment services in support of personalized medicine. eCancer Medical Science Journal.
                                19. Stamatakos, G.S., Dionysiou, D.D., Lunzer, A., Belleman, R., Kolokotroni, E., Georgiadi, E., Erdt, M., Dong, F., Rueping, S., Giatili, S., d Onofrio, A., Sfakianakis, S.G., Marias, K., Desmedt, C., Tsiknakis, M.N., & Graf, N. (2014). The Technologically Integrated Oncosimulator: Combining Multiscale Cancer Modeling with Information Technology in the In Silico Oncology Context. . , 18(3), 840-854, doi: 10.1109/JBHI.2013.2284276.
                                20. Hristoskova, A., Sakkalis, V., Zacharioudakis, G., Tsiknakis, M.N., & De Turck, F. (2014). Ontology-Driven Monitoring of Patient’s Vital Signs Enabling Personalized Medical Detection and AlertSensors 14(1), 1598-1628.
                                21. Vavoulas, G., Pediaditis, P., Chatzaki, C, Spanakis, E.G., & Tsiknakis, M.N. (2014). The MobiFall Dataset: Fall Detection and Classification with a SmartphoneInternational Journal of Monitoring and Surveillance Technologies Research (IJMSTR)2(1), 44-56, IGI Global.
                                22. Kouroubali, A., Katehakis, D.G., Berler, A., & Tsiknakis, M.N. (2013). Electronic Health Record: Luxury or Need? (in Greek). Health Review Scientific Magazine24(140), 5-9, Greece: Hellenic Health Services Management Association (HHSMA).
                                23. Genitsaridi , I., Kondylakis, H., Koumakis, L., Marias, K., & Tsiknakis, M.N. (2013). Towards Intelligent Personal Health Record Systems: Review, Criteria and Extensions.  Procedia Computer Science 13, 327-334, (1877-0509).
                                24. Graf, N., Anguita, A., Bucur, A., Burke, D, Claerhout, B., Coveney, P.V., d Onofrio, A., Forgó, N., Hahn, C, Hintz, J, Jefferys, B, Kiefer, S., Marias, K., McVie, G, Ohmann, Ch., Persidis, A, Dong, F., Rossi, S, Rueping, S., Schwarz, U., Stamatakos, G.S., Stanulla, M, Stenzhorn, H., Tanaka, Y., & Taylor, M, Tsiknakis, M.N. (2012). P-MEDICINE: A SOLUTION FOR TRANSLATIONAL RESEARCH?. PEDIATRIC BLOOD & CANCER, WILEY PERIODICALS59.
                                25. Pediaditis, M., Tsiknakis, M.N., & Leitgeb, N. (2012). Vision-based human motion detection, analysis and recognition in epilepsy – a systematic review. Comput. Methods Programs Biomed.108(3), 1133-1148.
                                26. Brochhausen, M., Spear, A.D., Cocos, C., Weiler, G., Martin, L., Anguita, A., Stenzhorn, H., Daskalaki, E., Schera, F., Schwarz, U., Sfakianakis, S.G., Kiefer, S., Doerr, M., Graf, N., & Tsiknakis, M.N. (2011). The ACGT Master Ontology and its applications - Towards an ontology-driven cancer research and management systemJournal of Biomedical Informatics44(1), 8-25, (1532-0480; 1532-0464).
                                27. Marias, K., Dionysiou, D.D., Sakkalis, V., Graf, N., Bohle, R., Coveney, P.V., Wan, S., Folarin, A., Büchler, P., Reyes, M., Clapworthy, G., Liu, E., Sabczynski, J., Bily, T., Roniotis, A., & Tsiknakis, M.N. (2011). Clinically-Driven Design of Multiscale Cancer Models: the Contra Cancrum Project Paradigm. J. R. Soc Interface Focus1, 450-461.
                                28. Tsiliki, G., Zervakis, M.E., Ioannou, M., Sanidas, E., Stathopoulos, E., Potamias, G.A., Tsiknakis, M.N., & Kafetzopoulos, D. (2011). Multi-platform Data Integration in Microarray Analysis. IEEE Transactions on Information Technology in Biomedicine15(6), 806-812, IEEE Engineering in Medicine and Biology Society, IEEE Computer Society [Technical Co-Sponsor] (1089-7771).
                                29. Brochhausen, M., Grigonyte, G., Martin, L., Graf, N., Haller, J., Smith, B., & Tsiknakis, M.N. (2010).  The ACGT Master Ontology and its applications – Towards an ontology-driven cancer research and management system.
                                30. Sfakianakis, S.G., Blazadonakis, M.E., Dimou, I.N., Zervakis, M.E., Tsiknakis, M.N., Potamias, G.A., Kafetzopoulos, D., & Lowe, D. (2010). Decision Support Based on Genomics: Integration of Data and Knowledge Driven Reasoning. International Journal of Biomedical Engineering and Technology 3(3/4), 287-307.
                                31. Kanterakis, A., Potamias, G.A., Zacharioudakis, G., Koumakis, L., Sfakianakis, S.G., & Tsiknakis, M.N. (2010). Scientific discovery workflows in bioinformatics: a scenario for the coupling of molecular regulatory pathways and gene-expression profiles. Stud Health Technol Inform160, 1304-1308.
                                32. Graf, N., Hoppe, A., Georgiadi, E., Belleman, R., Desmedt, C., Dionysiou, D.D., Erdt, M., Jacques, J., Kolokotroni, E., Lunzer, A., Tsiknakis, M.N., & Stamatakos, G.S. (2009). "In silico" oncology for clinical decision making in the context of nephroblastoma. Klinische Pädiatrie221(3), 141-149, (14393824).
                                33. Tsiknakis, M.N., & Kouroubali, A. (2009). Organizational factors affecting successful adoption of innovative eHealth services: A case study employing the FITT framework. Int.J.Med.Informatics78(1), 39-52, (13865056).
                                34. Zervakis, M.E., Blazadonakis, M.E., Tsiliki, G., Danilatou, V., Tsiknakis, M.N., & Kafetzopoulos, D. (2009). Outcome prediction based on microarray analysis: A critical perspective on methods. BMC Bioinformatics10, (14712105).
                                35. Tsiknakis, M.N., Brochhausen, M., Nabrzyski, J., Pucacki, J., Sfakianakis, S.G., Potamias, G.A., Desmedt, C., & Kafetzopoulos, D. (2008). A semantic grid infrastructure enabling integrated access and analysis of multilevel biomedical data in support of postgenomic clinical trials on cancer. IEEE Trans Inf Technol Biomed12(2), 205-217, (10897771).
                                36. Graf, N., Desmedt, C., Buffa, F., Kafetzopoulos, D., Forgó, N., Kollek, R., Hoppe, A., Stamatakos, G.S., & Tsiknakis, M.N. (2008). Post-genomic clinical trials: The perspective of ACGT. eCancerMedicalScience Journal, 2008 (online journal)1(66), eCancerMedicalScience Journal.
                                37. Maojo, V., & Tsiknakis, M.N. (2007). Biomedical Informatics and HealthGRIDs: A European Perspective - Past and Current Efforts and Projects in the Synergy of Bionformatics and Medical Informatics. Engineering in Medicine and Biology Magazine, IEEE26(3), 34-41, (0739-5175).
                                38. Katehakis, D.G., Sfakianakis, S.G., Kavlentakis, G., Anthoulakis, D., & Tsiknakis, M.N. (2007). Delivering a Lifelong Integrated Electronic Health Record Based on a Service Oriented Architecture. IEEE Transactions on Information Technology in Biomedicine11(6), 639-650.
                                39. Tsiknakis, M.N., Rueping, S., Martin, L., Sfakianakis, S.G., Bucur, A., Sengstag, T., Brochhausen, M., & Pucacki, J. (2007). Developing a European Grid infrastructure for cancer research: vision, architecture, and services. eCancerMedicalScience Journal (on line journal)1, eCancerMedicalScience Journal.
                                40. Chronaki, C., Kouroubali, A., Stathopoulou, A., Roumeliotaki, T., Orphanoudaki, E., Esterle, L., & Tsiknakis, M.N. (2007). Internet use for health and illness in Greece. Preliminary results of a European study on eHealth consumer trends. Archives of Hellenic Medicine Magazine24(5), 440-457.
                                41. Potamias, G.A., Koumakis, L., Kanterakis, A., Moustakis, V.A., Kafetzopoulos, D., & Tsiknakis, M.N. (2007). Mining interesting clinico-genomic associations: The HealthObs approach. Artificial Intelligence and Innovations 2007: from Theory to Applications, IFIP International Federation for Information Processing247, 137-145, (15715736; 0387741607 (ISBN); 9780387741604 (ISBN)).
                                42. Stamatakos, G.S., Dionysiou, D.D., Graf, N., Sofra, N.A., Desmedt, C., Hoppe, A., Uzunoglu, N.K., & Tsiknakis, M.N. (2007). The Oncosimulator: a multiscale simulation platform of tumor growth and organism response to therapeutic schemes in the clinical setting. eCancerMedicalScience Journal (on line journal), 6628-6631, eCancerMedicalScience Journal.
                                43. Conforti, D., Costanzo, D., Lagani, V., Perticone, F., Parati, G., Kawecka-Jaszcz, K., Marsh, A., Biniaris, C., Stratakis, M., Fontanelli, R., Guerri, D., Salvetti, O., Tsiknakis, M.N., Chiarugi, F., Gamberger, D., & Valentini, M. (2006). HEARTFAID: A knowledge based platform for supporting the clinical management of elderly patients with heart failure. J.Inf.Technol.Healthc.4(5), 283-300, (1479649X).
                                44. Conforti, D., Costanzo, D., Perticone, F., Parati, G., Kawecka-Jaszcz, K., Marsh, A., Biniaris, C., Stratakis, M., Fontanelli, R., Guerri, D., Salvettis, O., Tsiknakis, M.N., Chiarugi, F., Gamberger, D., & Valentini, M. (2006). HEARTFAID: A Knowledge Based Platform of Services for Supporting Medical-Clinical Management of Heart Failure Within Elderly Population. Stud Health Technol Inform, 108-125.
                                45. Tsiknakis, M.N., Katehakis, D.G., Sfakianakis, S.G., Kavlentakis, G., & Orphanoudakis, S.C. (2005). An Architecture for Regional Health Information Networks Addressing Issues of Modularity and Interoperability. Journal of Telecommunications and Information Technology (JTIT)4, 26-39.
                                46. Tzelepis., Th.Z., Tsiknakis, M.N., Katehakis, D.G., & Orphanoudakis, S.C. (2004). Design and Implementation of "Two-level" Clinical Information Systems, based on Archetypes. The Official International E.C.Qua.L. Journal for Quality of Life Research (J.Q.L.R.)2(1), 101-105.
                                47. Potamias, G.A., Kafetzopoulos, D., & Tsiknakis, M.N. (2004). Integrated Clinico-Genomics Environment: Design and Operational Specification. Journal for Quality of Life Research (JQLR)2(1), 145-150.
                                48. Manganas, A., Tsiknakis, M.N., Leisch, E., Karefilaki, L., Monsieurs, K.G., Bossaert, L.L., & Giorgini, F. (2004). JUST in time health emergency interventions: an innovative approach to training the citizen for emergency situations using virtual reality techniques and advanced IT tools (the Web-CD). Studies in health technology and informatics103, 315-326, Netherlands (0926-9630).
                                49. Monsieurs, K.G., Vogels, C., Bossaert, L.L., Meert, P., Manganas, A., Tsiknakis, M.N., Leisch, E., Calle, P.A., & Giorgini, F. (2004). Learning effect of a novel interactive basic life support CD: The JUST system. Resuscitation62(2), 159-165, (03009572).
                                50. Manganas, A., Tsiknakis, M.N., Leisch, E., Ponder, M., Molet, T., Herbelin, B., Magnenat-Thalmann, N., Thalmann, D., Fato, M., & Schenone, A. (2004). The JUST VR tool: An innovative approach to training personnel for emergency situations using virtual reality techniques. J.Inf.Technol.Healthc.2(6), 399-412, (1479649X).
                                51. Katehakis, D.G., Sfakianakis, S.G., Tsiknakis, M.N., & Orphanoudakis, S.C. (2003). An Infrastructure for Integrated Electronic Health Record Services: The Role of XML (Extensible Markup Language). , 77, 1074-1079, Gunther Eysenbach; Centre for Global eHealth Innovation, Toronto, Canada (1438-8871).
                                52. Chronaki, C., Chiarugi, F., Lees, P.J., Charalambous, E., Sykianakis, A., Vrouchos, G., Antonakis, N., Frantzeskakis, G., Tsiknakis, M.N., & Orphanoudakis, S.C. (2003). Digital ECG Databases in the Regional Health Information Network of Crete. International Journal of Bioelectromagnetism5(1), 118-119.
                                53. Katehakis, D.G., Tsiknakis, M.N., & Orphanoudakis, S.C. (2002). A healthcare information infrastructure to support integrated services over regional health telematics networks. Health IT Journal4, 15-18, Medical Records Institute.
                                54. Tsiknakis, M.N., Katehakis, D.G., & Orphanoudakis, S.C. (2002). An open, component-based information infrastructure for integrated health information networks. Int.J.Med.Informatics68(1-3), 3-26, (13865056).
                                55. Chiarugi, F., Lombardi, D., Lees, P.J., Chronaki, C., Tsiknakis, M.N., & Orphanoudakis, S.C. (2002). Support of daily ECG procedures in a cardiology department via the integration of an existing clinical database and a commercial ECG management system. Ann.Noninvasive Electrocardiol.7(3), 263-270, (1082720X).
                                56. Katehakis, D.G., Tsiknakis, M.N., & Orphanoudakis, S.C. (2002). Towards an Integrated Electronic Health Record - Current Status and Challenges in Business Briefing: Global Healthcare 2002. The Official Publication of the World Medical Association.
                                57. Katehakis, D.G., Sfakianakis, S.G., Tsiknakis, M.N., & Orphanoudakis, S.C. (2001). An infrastructure for integrated electronic health record services: The role of XML (extensible markup language). J.Med.Internet Res.3(1), 83-91, (14388871).
                                58. Katehakis, D.G., Kostomanolakis, S.G., Tsiknakis, M.N., & Orphanoudakis, S.C. (2001). An open, component-based information infrastructure to support integrated regional healthcare networks. Medinfo10(Pt 1), 18-22, (15696332).
                                59. Katehakis, D.G., Sfakianakis, S.G., Tsiknakis, M.N., & Orphanoudakis, S.C. (2000). An infrastructure for integrated electronic health record services: the role of XML. Technol.Health Care8(3-4), 189-190, Amsterdam, The Netherlands, The Netherlands: IOS Press (0928-7329).
                                60. Potamias, G.A., Tsiknakis, M.N., Katehakis, D.G., Karabela, E., Moustakis, V.A., & Orphanoudakis, S.C. (2000). Role-based access to patients clinical data: the InterCare approach in the region of Crete. Studies in health technology and informatics77, 1074-1079, Netherlands (0926-9630).
                                61. Orphanoudakis, S.C., Chronaki, C., Tsiknakis, M.N., & Kostomanolakis, S.G. (1998). Telematics in Healthcare. The Kluwer international series in engineering and computer science.VLSI, computer architecture and digital signal processing, (465), 251, (0893-3405).
                                62. Leisch, E., Sartzetakis, S., Tsiknakis, M.N., & Orphanoudakis, S.C. (1997). A framework for the integration of distributed autonomous healthcare information systems. Med.Inform.22(4), 325-335, (03077640).
                                63. Tsiknakis, M.N., Chronaki, C., Kapidakis, S., Nikolaou, Ch., & Orphanoudakis, S.C. (1997). An Integrated Architecture for the Provision of Health Telematic Services Based on Digital Library Technologies. Int.J.on Digital Libraries1(3), 257-277.
                                64. Katehakis, D.G., Tsiknakis, M.N., Armaganidis, A., & Orphanoudakis, S.C. (1997). Functional and control integration of an ICU, LIS and PACS information system. Studies in health technology and informatics43 Pt A, 15-19, NETHERLANDS (0926-9630 (Print)).
                                65. Leisch, E., Tsiknakis, M.N., & Orphanoudakis, S.C. (1997). Pre-hospital health emergency management as an integrated service of the Regional Health Telematics Network of Crete.. Stud Health Technol Inform43 Pt A, 33-37, (09269630).
                                66. Chronaki, C., Tsiknakis, M.N., & Orphanoudakis, S.C. (1997). Virtual workspaces in I2Cnet. Int.J.Med.Inform.47(1-2), 115-119, Shannon, Ireland: Elsevier Sci Ireland Ltd (13865056).
                                67. Chronaki, C., Katehakis, D.G., Zabulis, X., Tsiknakis, M.N., & Orphanoudakis, S.C. (1997). WebOnCOLL: Medical collaboration in regional healthcare networks. IEEE Trans Inf Technol Biomed1(4), 257-269, (10897771).
                                68. Tsiknakis, M.N., Chronaki, C., Tsilimbaris, M.K., Panagopoulou, S.I., Orphanoudakis, S.C., & Pallikaris, I.G. (1996). A multimedia integration methodology through the meta patient record concept in a cornea outpatient clinic. Invest.Ophthalmol.Vis.Sci.37(3), (01460404).
                                69. Tsiknakis, M.N., Katehakis, D.G., & Orphanoudakis, S.C. (1996). Intelligent image management in a distributed PACS and telemedicine environment. IEEE Commun Mag34(7), 36-45, (01636804).
                                70. Orphanoudakis, S.C., Kaldoudi, E., & Tsiknakis, M.N. (1996). Technological advances in teleradiology. EUR.J.RADIOL.22(3), 205-217, (0720048X).
                                      Magazine article

                                    1. Kouroubali, A., Katehakis, D.G., Berler, A., & Tsiknakis, M.N. (2013). Electronic Health Record: Luxury or Need?. Health Review Scientific Magazine24, 5-9.
                                          ERCIM News

                                        1. Tsiknakis, M.N. (2007). Open Grid Services for Improving Medical Knowledge DiscoveryERCIM News70, 34-35, July 2007.
                                        2. Tsiknakis, M.N. (2006). ACGT - Advancing Clinico-Genomic Trials on CancerERCIM News65, 5, April 2006.
                                        3. Orphanoudakis, S.C., Kafetzopoulos, D., & Tsiknakis, M.N. (2005). Biomedical Informatics in Support of Individualized MedicineERCIM News60, 12-13, January 2005.
                                        4. Tsiknakis, M.N., & Kafetzopoulos, D. (2005). ERCIM Working Group on Biomedical InformaticsERCIM News60, 15-16, January 2005.
                                        5. Tsiknakis, M.N., & Orphanoudakis, S.C. (1997). An Integrated Architecture for the Provision of Health Telematic Services in a Regional NetworkERCIM News29, April 1997.
                                        6. Chronaki, C., Zabulis, X., Tsiknakis, M.N., & Orphanoudakis, S.C. (1997). Web-based Medical Services in the Regional Health Care Network of CreteERCIM News29, April 1997.
                                        7. Tsiknakis, M.N. (1995). CoMed - Cooperation in MedicineERCIM News21, April 1995.

                                            Technical & Research Reports (4)

                                                  ICS-FORTH Technical Reports

                                                1. Kouroubali, A., Katehakis, D.G., Berler, A., & Tsiknakis, M.N. (2012). Electronic Health Records: An Implementation proposal for National Health Care organizations. 2012.TR431_EHR.pdf.
                                                2. Chronaki, C., Kouroubali, A., Esterle, L., Orphanoudaki, E., Roumeliotaki, T., Stathopoulou, A., & Tsiknakis, M.N. (2006). eHealth Consumer Trends Survey in Greece: Results of the 1st phase. 2006.TR365_eHealth_Consumer_Trends_Survey.pdf.
                                                3. Katehakis, D.G., Sfakianakis, S.G., Anthoulakis, D., Kavlentakis, G., Tzelepis., Th.Z., Orphanoudakis, S.C., & Tsiknakis, M.N. (2005). A Holistic Approach for the Delivery of the Integrated Electronic Health Record within a Regional Health Information Network. 2005.TR350_Holistic_Approach_Delivery_Integrated_Electronic_Health_Record.pdf.
                                                4. Katehakis, D.G., Chalkiadakis, V., Tsiknakis, M.N., & Orphanoudakis, S.C. (1999). A Distributed, Agent-Based Architecture for the Acquisition, Management, Archiving and Display of Real-Time Monitoring Data in the Intensive Care Unit

                                                        Others (2)

                                                              Miscellaneous

                                                            1. Chronaki, C., Kostomanolakis, S.G., Tsiknakis, M.N., & Orphanoudakis, S.C. (2000). Advanced imaging services in a health-telematics network. Poster Presentation in the ECR 2000/Compurad Exhibit. Vienna Austria, 5-10 March.
                                                            2. Lees, P.J., Chronaki, C., Simantirakis, E.N., Tsiknakis, M.N., Orphanoudakis, S.C., & Vardas, P.E. (1999). Remote Access to Medical Records via the Internet: Is it Feasible?. Poster Presentation in XXIst Congress of the ESC. Barcelona Spain, Aug 28th - Sep. 1st.
                                                                Found: 265 publications
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